Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01337 ATGGATCCTTTCAAAGGATCCGAACCCGAAAACCCTATCGCCACATGCCTTTCCATGCTCTCCCTCCGCCGCTTCTCCGCCTGCCGAGACTTCGCCCGCCGCCTCCCTCCATCCGACAACATCGCCCGACTCCTCGCCGTAGCCGACGTTCTCTCCGCCGTTGACTTCTATTCCGTTCTCCAGCTCCAACGCTCCAACGGTTTCAACCGCGACCTCACGCGGCGGCAGTACGCGAAGCTGGCGCTCCTCCTGGACCCGACGAGCCCTGACAAGTTCCCCTTCTCAGATGAGGCCCTCGCACGTGTGCAGGAAGCCTGGCACGTGCTCTCCCACCCCGAGCGCCGTGCCCTCTACGACCGCGAGCACCCATTCCCCGCAACGGCGACGTTTTGGAGCGCGTGCCCCTACTGCTGGAATATCTTCGAGTACGAGAAGATGTACGAGGATTGCGCGCTGCAGTGCCAGGTTTGTGGGAAGGCGTTCCAGGGCGTGGCGGTGGAGTCGCCGGCAATGGTGGGCGACACAGTGGTGGAGGGAGAGGAACTCCGGCAGTACTACTCGTGCGAGTCGAGTGTGCCCTTGATGTATTATGAGGTAAAGGAGGAGATTAAGGGTAGGAACGTTTTTGGTGAACAAAATGCTGCACCGATTGTGGATATTTCTGATGATGATAATGAAGGGTCTGTTATAAGAAATGAAGGGTTGCAAGGGAATGGTGAGAAGCGGCGAATGAGGGTAAAAACTGTAGCGAAGAGGGTTAGAGGGAACAGGATGACTGGGCCTCTTGATAGTGATTTGGATTTGGATTTGAGTGAAGAAGATGGTGAATTGGAGTTCATTGAAGGAGAGGATGATATCTTTGTCGGTGTGCGATTTCAAAAGTGA 885 0.5571 MDPFKGSEPENPIATCLSMLSLRRFSACRDFARRLPPSDNIARLLAVADVLSAVDFYSVLQLQRSNGFNRDLTRRQYAKLALLLDPTSPDKFPFSDEALARVQEAWHVLSHPERRALYDREHPFPATATFWSACPYCWNIFEYEKMYEDCALQCQVCGKAFQGVAVESPAMVGDTVVEGEELRQYYSCESSVPLMYYEVKEEIKGRNVFGEQNAAPIVDISDDDNEGSVIRNEGLQGNGEKRRMRVKTVAKRVRGNRMTGPLDSDLDLDLSEEDGELEFIEGEDDIFVGVRFQK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01337 294 SMART dnaj_3 54 114 IPR001623 -
Spst2g01337 294 Gene3D DnaJ domain 50 122 IPR036869 -
Spst2g01337 294 CDD DnaJ 55 110 IPR001623 -
Spst2g01337 294 SUPERFAMILY Chaperone J-domain 48 121 IPR036869 -
Spst2g01337 294 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 240 - -
Spst2g01337 294 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Spst2g01337 294 Pfam DnaJ domain 55 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01337 Spst-Chr2 12079569 12080453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01337 44 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 34.807 1.50e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01337 - - gsj:114406356 398.667