Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01325 ATGGCTCTTCCTGGTTCCTTGCAGTTGTCCCACGGACTGGGACTTTGCAGGAACCTGGGCTGCAATAAACATTCGAAGGCAACGGGACATGGCAAGTTACATTTACTTAGTGCGGGTCCTTCATATCCTATTTCGTTCATGAGACAGGAGTGCAGGGATTTTCAACATCTTCGACATATAAACAAGCCAACACATAGATTATCATGCAAATCCCGATCCTTTAAGTGTAATTGTTTTATGGTGTCAGGCCAACCGAATGATCTTCCTGCTGTTAAGTTGGCTGCTACAGTGTTGGCTAGGTCTAGTAATGTGTTACAAAATAGTCCTATCATAGTAAAGTTGATTCCTGCAATTGGCGTTATCATTTTTGCAATATGGGGTGTTGGACCATTATTGTTTCAGACAAGGAAAATACTTTTTCAGAGGAGTGATAATAGTTGGAAGAAAAGTACCACTCACTATATAGTGACTTCTTACCTTCGGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGGGCATTGGAGCCATTAATTCTACCTTCAGAACCTGGCCAGGTTGTTAAGGAACGGCTTCTGAATTTTGTAAGATCATTGTCAACGGTACTGGCCTTCGCCTATTGTTTGTCAAGTGTAATTCAACAATTACAGAAATTCTTAGCAGAGGGTACTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTACTCAGCGGTATGGATTGCTGCATTTTCATTGTTCATGGAATTGTTAGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCAAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCGCTTTTGATTCTGGTGTCTTGTTTTGTTAAGACGTCACATTTTGAAGAATATCTGTGCGTTAAGGAAGCAATACTGTTGGATCTTCTTAGAGTTATAGGTCATCACCGGGCCAGGCTTGCAACACCGGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAATATACCGTTTGCAGATTCGACATTTGGTCGTGGTGCTGGCACTGTACCTAACCGTCCATTATTAGTGATTGAACCATCTTACAAAATCAATGGAGATGATAAGATGAAAAGTCGATCAGCACGACCAGCTCTTGATCAAGATAATAAGACATCTAACTCTGATGCCAATGGAAACTCTAAGACAGTTGTGACATCTAACTCTGACACAAATGGAAAGACAGTTGTGACACCCAAATCTGATCCTGAACTGGGTGAAAACAAGCCACTGAAATCAGATTCAAACAAGGAAAACGTGGAGGTTGCAGAACCTTCTTCTAAATCTAAAGTATACGGTTTGGTAGTAGAAAATTTAGCCCAGAAGGACATAGATGCCAAACAGTCCAAGGGTCAGACTACTAAAAACATAAAGCCAAATATTGAGTCTGAAAATGTACTGTCCTCCTCATCTAACAATGCTGACAAAACTGGTGGACTTAATACGAATATACCATTAAAACAGCAAGGAGAAAAGAAACCTGCTTCACAGCCTCATGCATCGAGGGCTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAGGAGATTGACAATGTGACATCTCGAGAGGCCAAGGAAATGGCTGCATTCCAGGGTGGAAATGGATCTCCAAAGGCTCCAGATGGAAATGACTACTTGTAA 2115 0.4132 MALPGSLQLSHGLGLCRNLGCNKHSKATGHGKLHLLSAGPSYPISFMRQECRDFQHLRHINKPTHRLSCKSRSFKCNCFMVSGQPNDLPAVKLAATVLARSSNVLQNSPIIVKLIPAIGVIIFAIWGVGPLLFQTRKILFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRALEPLILPSEPGQVVKERLLNFVRSLSTVLAFAYCLSSVIQQLQKFLAEGTDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSTFGRGAGTVPNRPLLVIEPSYKINGDDKMKSRSARPALDQDNKTSNSDANGNSKTVVTSNSDTNGKTVVTPKSDPELGENKPLKSDSNKENVEVAEPSSKSKVYGLVVENLAQKDIDAKQSKGQTTKNIKPNIESENVLSSSSNNADKTGGLNTNIPLKQQGEKKPASQPHASRAVLEENIVLGVALEGSKRTLPIDEEIDNVTSREAKEMAAFQGGNGSPKAPDGNDYL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01325 704 MobiDBLite consensus disorder prediction 499 574 - -
Spst2g01325 704 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Spst2g01325 704 Gene3D - 195 297 - -
Spst2g01325 704 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Spst2g01325 704 MobiDBLite consensus disorder prediction 512 544 - -
Spst2g01325 704 Gene3D - 299 354 IPR023408 -
Spst2g01325 704 MobiDBLite consensus disorder prediction 551 570 - -
Spst2g01325 704 MobiDBLite consensus disorder prediction 592 648 - -
Spst2g01325 704 MobiDBLite consensus disorder prediction 681 704 - -
Spst2g01325 704 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 685 IPR045042 -
Spst2g01325 704 MobiDBLite consensus disorder prediction 592 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01325 Spst-Chr2 11918238 11925221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01325 9 693 Mechanosensitive Ion Channel Family AT5G10490 57.453 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01325 K22047 - gmx:100796304 1253.04