Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01319 ATGGATGCAATCCAAACAGAGAAAGTCTATGTTGCTGTTGGTAATGACGCGCAAGATGGATTTAAGACTTTGAATTGGGCTCTCAAGAAATGGAATTCTCATCCAATTTCCGTTGTCATCCTCCATGTCACACACACTACTCCCATGGATTATGTCCATACACCATTTGGGAAACTTCCAGCAAGATCTGTGAGTGAGGAGAAACTACAAATTCTCAGGAAAGACGAGCAAGATAAAATCAACAAGCTGCTTTCCAAGTATGTTGCTTTCTGTAGCAAGGTGCCAGCAGAGATTCTTGAAGTTGAGAAATCTGATGAACCAATGCAAAAGCGAGTCATAGACTTGATCTTTGGTCTAGGAATAAACAAATTGGTCATGGGATTTTCATTCATGAAGCCCTCAACGAAATCAAAAGGTGCTATTAGTGGATTATTCTATGTTCATCAGCACAAGCCTTCCTTCTGTGAATTGTTCATTATTTGTGGGGGGAAGCAAGTTTTCCTCAGAGGAAAAAATGATGAGAAAATCATGGAGGATGATAATGGGGTCATGGTTGCAAGAATCAGAGATAAGATAACCTTCAGAGATTGGTTAGACAAATGGTTCAATGACAAAACCAACGATTCTCAAGGTAGAAGTGCATCACTTTCCTCAAGCAATTTGGAGTCCCCTGTGAACAGAAGCCAGTGGGAATTTTACCTGCAAGAAATTGAAAAATATTATCAAGAATTGTTGTCTTCCAAGATGGAGGAAGGAAGCTGCGGGCTAGATAATGACGACTCACACATTGGTCCAAATGAGCCACATGTCACTGAACACAACGATTTTAATATGAGTGGTGCAGAAAGAATTGAGATCCTGAAAAATAAGCTGAATGAAGCTCAGAAGACCATCCTATTGAAGAGAAAAGAGGCCAAAGAGAGTAAAGAGCGGCACGCAAAAGCTGAATGGGCAATTTGTCTATGCAACAGTAGGGCTGAAGAAGTGGAAGGTCGAATTCGGGAGGAGGTGGATGCTAAGGAGGAGCTAAAGAAGGAATGGGAAGCAGAGAGAGAGCAGACAGAGGAGATGAGAACGGAGGTGGAGGAGAGGAGGAGGAGGCTCAGTTCCCTTACGGAGGTGCAATCGGAGCTCTCCAACAGGCTTCACATATGGACGGTGGCCAAGACGCGGGCGGAGACGCAGCTGGAGAGGGCGGTGGGGGAGAGGAGGGAGATGATGGGGGAGATCGAGGAGCTGAGACGCCAGAGAGACGTGCTCAACCGAAGGATAGAGTTCTGCAAGCAGAAGGACGCCATCGGAATGGCCGCGAGGCTCGCCGACACGTGCTGCACCTTCCGCGAGTACACGGCGGAGGAGATCCGCTTGGCCACTGACAACTTCTCCGAGCGGCTGAGGTTGAAATCCGGCGGAGATTGGAGCAATTTGTACAGAGGACGCTTCAACCACTCCACTGTTGCCATCAAGATGCTCCCTTCCTTCTCCCTCCAACATTTTCAATCCAAGGTGAAGCTTCTTGGCGATATTAGGCATCCTCATCTGGTTGCCATGATGGGGTTTTGCTCCGAGCCCAAATGCATTGTTTTGGAATACATGCGCAACGGAAGCTTACGAGACATGTTGTTTTGTAGGAGAAAAAACCGTCCCTTAAGATGGCATGACCGAATACGAATTGCCACAGAAGTTTGTTCGGGCCTGGGCTTTCTTAATGCAGCTGAGCCAAGGCCCGTTATTCACTGCCATTTGACGCCATCCCAAGTCCTCCTAGACCGCAATTTAGTTGCAAAGATCACGGGCATTGGGCTCTATGATTGCCATGACGAACAGTGTAACATTCAGTCAGATTTGCGGGCTATAGGGGTTTTGTTAATGCATCTTTTGACAGGAAGAAATTGGGCCGGTCTCATTGAGGAGGTGATGACAGTGGAAATGGATAGAGAGGCTTTCGCTAGCGTTCTTGATGAGATGGCTGGGCAATGGCCATTGGATCTAGCAAAGGAACTTGCAGGCCTGGCTATGAGGTGCATGTCCACCAAAAGCAAGCCTAATTCCGAACTGAGCATTGCACAGGTCTTGCAGGAACTGAATGAGATAAGAAGAAAGGGGAATGAAATAGTTGGAAGGGAAGGGCTAAAGTCAATTATTGGGGGGTGTATAGATAGGGAGGGATCCAGTGATGTGCCTAGTGTTTTTGTTTGCCCCATTCTTCAGGAGGTGATGAAAAACCCACACTTAGCAGCAGATGGGTTTTCTTATGAGCTTGAAGCAATAGATCACTGGCTGCAATCGGGGCGTGACACATCACCAATGACAAATTTGAGGCTGAAGCACACATTCCTCACCCCGAATCACACTCTCCGTTCCCTAATTGAGGATTGGCAGACCAACAAATCACCTAAACTTCCACACTAA 2412 0.4677 MDAIQTEKVYVAVGNDAQDGFKTLNWALKKWNSHPISVVILHVTHTTPMDYVHTPFGKLPARSVSEEKLQILRKDEQDKINKLLSKYVAFCSKVPAEILEVEKSDEPMQKRVIDLIFGLGINKLVMGFSFMKPSTKSKGAISGLFYVHQHKPSFCELFIICGGKQVFLRGKNDEKIMEDDNGVMVARIRDKITFRDWLDKWFNDKTNDSQGRSASLSSSNLESPVNRSQWEFYLQEIEKYYQELLSSKMEEGSCGLDNDDSHIGPNEPHVTEHNDFNMSGAERIEILKNKLNEAQKTILLKRKEAKESKERHAKAEWAICLCNSRAEEVEGRIREEVDAKEELKKEWEAEREQTEEMRTEVEERRRRLSSLTEVQSELSNRLHIWTVAKTRAETQLERAVGERREMMGEIEELRRQRDVLNRRIEFCKQKDAIGMAARLADTCCTFREYTAEEIRLATDNFSERLRLKSGGDWSNLYRGRFNHSTVAIKMLPSFSLQHFQSKVKLLGDIRHPHLVAMMGFCSEPKCIVLEYMRNGSLRDMLFCRRKNRPLRWHDRIRIATEVCSGLGFLNAAEPRPVIHCHLTPSQVLLDRNLVAKITGIGLYDCHDEQCNIQSDLRAIGVLLMHLLTGRNWAGLIEEVMTVEMDREAFASVLDEMAGQWPLDLAKELAGLAMRCMSTKSKPNSELSIAQVLQELNEIRRKGNEIVGREGLKSIIGGCIDREGSSDVPSVFVCPILQEVMKNPHLAADGFSYELEAIDHWLQSGRDTSPMTNLRLKHTFLTPNHTLRSLIEDWQTNKSPKLPH 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01319 803 ProSiteProfiles Protein kinase domain profile. 462 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01319 803 Pfam U-box domain 727 797 IPR003613 GO:0004842|GO:0016567
Spst2g01319 803 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 725 801 IPR013083 -
Spst2g01319 803 Pfam Protein tyrosine and serine/threonine kinase 475 608 IPR001245 GO:0004672|GO:0006468
Spst2g01319 803 Gene3D Phosphorylase Kinase; domain 1 435 531 - -
Spst2g01319 803 Gene3D Transferase(Phosphotransferase) domain 1 532 607 - -
Spst2g01319 803 SUPERFAMILY RING/U-box 724 797 - -
Spst2g01319 803 Gene3D Transferase(Phosphotransferase) domain 1 608 704 - -
Spst2g01319 803 ProSiteProfiles U-box domain profile. 726 800 IPR003613 GO:0004842|GO:0016567
Spst2g01319 803 SUPERFAMILY Protein kinase-like (PK-like) 446 679 IPR011009 -
Spst2g01319 803 Coils Coil 396 430 - -
Spst2g01319 803 Coils Coil 326 371 - -
Spst2g01319 803 SMART Ubox_2 730 793 IPR003613 GO:0004842|GO:0016567
Spst2g01319 803 CDD RING-Ubox_WDSUB1-like 728 783 - -
Spst2g01319 803 Coils Coil 284 311 - -
Spst2g01319 803 PANTHER OS02G0152300 PROTEIN 9 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01319 Spst-Chr2 11871920 11875950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01319 7 800 U-box Gene Family AT5G65500 49.690 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst2g01319 PK_Tyr_Ser-Thr 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01319 - - gmx:100786771 1352.42