Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01316 ATGGCATCGACGTTTAATCACGCGAAAGAGTTTACGAGCGACGACGAGGGATCTCCGAGGGCGATTCTGGAAACCGTTGTTTCGGAGACAGAGTCTGAGAACAGTGGAATTAGCGAAAGCTTCAATTCCGTGTCGTCAGAGAAGTCGCCGGCGGATAGTTACATGCAGCAGCAATGGAAGTCTATGGTCGACGTTTTCAAGTTCAAGTCTGTGCGAAAGTTAACGACCATTCCTTTGAACATTCCTATGTTTGCGGTGAGCCATGACATGTCTCGGAAGGGTTTTACCAAGAAACTGGCTCGTATTAGAAGTGCCGAAGATAATATTGATATTGGTGCTATTCCCTCGAAACCCTCTTGGAGAAACTTTGATTATGAAGAGTTGGTAGCTGCTACTAATGATTTCAGTTCTGAGAACCTGGTTGGGAAAGGTGGTCATGCTGAAGTTTACAAAGGCTGCTTACCTGATGGTCAAGTTATAGCTGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGACAGAGCGGGTGATTTCTTGACAGAGCTTGGGATTATTGCACACATAAACCACACAAATGCTACACACCTTGTTGGGTTTGGGGTTGATCGTGGCCTCTACTTTGTCCTACAATTAGCTCCACATGGAAGTCTTAGCTCTATGCTTTTTGGTTCTGAAGGCTTGGACTGGAAGAAACGATTCAAGATAGCTCTTGGAGTCGCTGATGGATTGCATTATCTCCATAAGGAGTGCCCAAGACGAATCATTCATAGGGACATCAAGGCCTCCAACATATTACTAAACGAAAATTATGAAGCTGAGATTTCGGATTTTGGACTGGCAAAGTGGCTTCCAAATAAGTGGGCCAACCACGTTGTGTTCCCAATAGAAGGAACATTTGGGTATTTGGCTCCGGAGTACTTTATGCATGGAATTGTGGATGAGAAAACTGATGTATTTGCGTTTGGAGTTTTGCTATTGGAGCTCATAACAGGCCGTCACGCTGTTGATACGGATAGTAGGCAAAGTCTTGTATCCTGGGCCAAGCCACATCTGGACGCAAAAAATGTAAAGGCCATAGCAGACCCCAGATTAGGAGAGGACTATGATCATAGTGAAATGCTGCTTCTCATGTTGACAGCTTCCATGTGTGTGCACAATGCATCCACCAAGCGGCCATTGATGAATAAGGTTGTGCAGCTGCTAAACGGTGAAGATCCAAGTTTAATGGACCTTAAGCAAAATTCAATTGCACCAAAATCCCAGTTGTTAGATGCATGTGACCTAGAAGATTATACTTGCTCGAGTTACCTGAAGGACATGAATCGCCACATGCAACTGATCATGGAGTGA 1353 0.4449 MASTFNHAKEFTSDDEGSPRAILETVVSETESENSGISESFNSVSSEKSPADSYMQQQWKSMVDVFKFKSVRKLTTIPLNIPMFAVSHDMSRKGFTKKLARIRSAEDNIDIGAIPSKPSWRNFDYEELVAATNDFSSENLVGKGGHAEVYKGCLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHTNATHLVGFGVDRGLYFVLQLAPHGSLSSMLFGSEGLDWKKRFKIALGVADGLHYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPNKWANHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRHAVDTDSRQSLVSWAKPHLDAKNVKAIADPRLGEDYDHSEMLLLMLTASMCVHNASTKRPLMNKVVQLLNGEDPSLMDLKQNSIAPKSQLLDACDLEDYTCSSYLKDMNRHMQLIME 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01316 450 Pfam Protein kinase domain 137 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01316 450 ProSiteProfiles Protein kinase domain profile. 135 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01316 450 SMART serkin_6 135 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01316 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Spst2g01316 450 MobiDBLite consensus disorder prediction 25 49 - -
Spst2g01316 450 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 214 416 - -
Spst2g01316 450 ProSitePatterns Protein kinases ATP-binding region signature. 141 163 IPR017441 GO:0005524
Spst2g01316 450 SUPERFAMILY Protein kinase-like (PK-like) 118 410 IPR011009 -
Spst2g01316 450 MobiDBLite consensus disorder prediction 1 49 - -
Spst2g01316 450 Gene3D Phosphorylase Kinase; domain 1 96 209 - -
Spst2g01316 450 Gene3D Transferase(Phosphotransferase) domain 1 214 418 - -
Spst2g01316 450 PANTHER OS08G0249100 PROTEIN 12 444 IPR046958 -
Spst2g01316 450 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 110 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01316 Spst-Chr2 11842781 11846587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01316 123 398 Trihelix Transcription Factor Family AT1G68690 47.552 1.88e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst2g01316 Pkinase 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01316 - - gmx:100818314 702.975