Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01304 ATGGCGTCAAAGGCTGAAGTGGAGCATCCCAGAAAGGCATTCGGATGGGCAGCTAGGGACCCTTCTGGTCATCTCTCCCCTTTCAATTTCTCTAGAAGGGAAACTGGTGAAAAAGACGTGGCATTCAAAGTGTTGTATTGTGGGATATGTCACTCTGACCTCCACATGGCAAAGAACGAATGGCGCTTTTCTATCTATCCTCTGGTCCCAGGGCATGAGATAACTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGATGCTTGGTTGATTCCTGTCGCACCTGCCAAAACTGTTCTAACAATCTTGAGAATTATTGTCCACAATTTACTCTCACCTACGGTGCCAAATATAAAGATGGTACCATCACATATGGAGGTTACTCTGATTCAATGGTTGCGGATGAACACTTCGTAGTTCGAATTCCTGATGGCTTACCACTTGATGTTGCTGCACCTCTTCTTTGTGCTGGGATCACAGTGTATAGCCCTCTCAGATATTTTGCACTGGACAAGCCTGGTATGCATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTAATAAGTACATCACCCAATAAAAAGGAGGAAGCAATACAACATCTTGGAGTTGACTCTTTTCTGATAAGCCGTGACCAAGATCAGATGAAGGCTGCAAAGGGTACTTTGGATGGTATTATTGACACAGTTTCTGCTGTTCATCCTTTATTTCCTATCATCGAGTTGCTCAAGTCTCCTGGAAAGGTTGTACTGGTGGGTGTACCAGAGAAGCCTCTGGAGCTGCCAGTGTTTTCTTTACTTGGGAGAAAGATAGTAACTGGGAGTAGCATTGGAGGGATGAAGGAGACCCAAGAGATGATTGACTTTGCTGCGGAACACAATGTAAAACCTGACATTGAGGTCATTCCTATTGATTATGTCAACACTGCTATGGAACGTCTCCATAAAGCTGATGTAAAATATAGATTTGTGATTGACATCGGAAACACACTAAAATCAAGCTCTTGA 1083 0.4469 MASKAEVEHPRKAFGWAARDPSGHLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMAKNEWRFSIYPLVPGHEITGVVTEVGSKVEKFKVGDKVGVGCLVDSCRTCQNCSNNLENYCPQFTLTYGAKYKDGTITYGGYSDSMVADEHFVVRIPDGLPLDVAAPLLCAGITVYSPLRYFALDKPGMHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKEEAIQHLGVDSFLISRDQDQMKAAKGTLDGIIDTVSAVHPLFPIIELLKSPGKVVLVGVPEKPLELPVFSLLGRKIVTGSSIGGMKETQEMIDFAAEHNVKPDIEVIPIDYVNTAMERLHKADVKYRFVIDIGNTLKSSS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01304 360 PANTHER ALDEHYDE REDUCTASE 6 355 IPR047109 GO:0016616
Spst2g01304 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Spst2g01304 360 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Spst2g01304 360 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Spst2g01304 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Spst2g01304 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Spst2g01304 360 Gene3D - 167 322 - -
Spst2g01304 360 SUPERFAMILY GroES-like 19 184 IPR011032 -
Spst2g01304 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Spst2g01304 360 FunFam Cinnamyl alcohol dehydrogenase 167 322 - -
Spst2g01304 360 CDD CAD1 14 351 IPR047109 GO:0016616
Spst2g01304 360 Gene3D - 16 352 - -
Spst2g01304 360 FunFam Uncharacterized protein 16 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01304 Spst-Chr2 11724899 11727669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01304 11 357 Monolignol Biosynthesis Gene Families AT4G37990 71.264 3.95e-171 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01304 K23232 - gmx:100816901 614.764