Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01303 ATGAAAGACGTCACCAAAGACGGCAATATTGAAATGGCAGCACAACCAGAAACTGAGCATCCTAAGAAGGCATTCGGATGGGCAGCTCGGCCCCCTTCTGGCCTTCTCTCACCTTTCAATTTCTCCAGAAGACATGAGATAGCTGGTGTAGTGACAGAGGTGGGAAGTAAAGTGAAAAGGTTCAGGGTTGGTGACAAGGTGGGTGTAGGATGCATGGTTGATTCCTGTCGCACCTGCAAAAGTTGTGTTGACAATCTTGAGAATTATTGTCCACAATATACACTCACATATGGTGCCAAGTATAGAGATGACACCATCACATATGGAGGCTACTCTGACTCAATGGTTGTGGATGAGCATTTTGTGATTCACATTCCTGATGGCTTTTACCATTTGATGCTGCTGCTCCTCACCTTGTGCTGGGATCACAGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGCGCTAAGGTCACAGTAATAAGTACATCACCTAACAAAAAGGAGGAAGCAATACAACATCTTGGAGCTGACTCTTTTCTGAGAAGCCGTGACCAGCATCAGATACGAACGCTGCGAAGGATTGAAATGGCATCACAGGGTGAAGTGGAGCATCCCAGAAAAGCATTCGGATGGGCAGCCAGGGACCCTTCTGGCCATCTCTCACCTTTCAACTTCTCCAGAAGGGAAACTGGTGAAAAAGATGTGGCATTCAAAGTGTTGTACTGTGGAATATGTCACTCTGACCTCCACATGATAAAGAACGAATGGTTCTTTTCTACCTATCCACTTGTCCCCGGGCATGAGATAGTTGGTGTAGTGACAGAGGTGGGAGGCAAAGTAGAAAAGTTCAAAATTGGGGACAAGGTGGGTGTGGGATGCTTGGTTGATTCCTGCCGCACATGCCAAAACTGTTCTGACAATCTTGAGAGTTATTGTCCACAATATACTCTCACATATGGTGCCAGATATAGAGATGGTACCATCACATATGGAGGTTACTCTGATTCAATGGTTGCAGACGAACACTTTGTGGTTCGAATTCCTGAAGGCTTACCCCTTGATGCTGCTGCGCCACTCCTTTGTGCTGGGATCACAGTGTATAGCCCTCTCAGATATTTTGCACTAGACAAGCCTGGTGTGCATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTAATAAGTACATCACCCCACAAAAAGGAAGAAGCAATTAAACATCTTGGAGCTGACTCCTTTATCATAAGCCGTGACGAAGATCAGATGCAGGCTGCTAGGGGTAGTTTGGATGGCATTATTGACACAGTTTTTGCCGCTCATCCTCTCTTACCTCTCATTGATTTGCTCAAGTCTCATGGAAAGCTTGTAATGGTCGGTGCACCGGTGAAGCCTCTGGAGCTGCTAATCTTTCCTTTGCTTATTGGGAGAAAGATAGTAGCTGGGAGTAACATTGGAGGTCTAAAGGAGACCCAAGAGATGATTGACTTTGCTGCGGAACACAATGTAAAACCTGACATTGAGGTCATTCCTATTGATTATATCAACACTGCAATGGAGCGTCTCCTCAAAGCAGATGTGAAATATAGATTTGTGATTGACATTGGAAACACACTAAAACCAAGCTTTTGA 1674 0.4558 MKDVTKDGNIEMAAQPETEHPKKAFGWAARPPSGLLSPFNFSRRHEIAGVVTEVGSKVKRFRVGDKVGVGCMVDSCRTCKSCVDNLENYCPQYTLTYGAKYRDDTITYGGYSDSMVVDEHFVIHIPDGFYHLMLLLLTLCWDHSHMAVKFAKAFGAKVTVISTSPNKKEEAIQHLGADSFLRSRDQHQIRTLRRIEMASQGEVEHPRKAFGWAARDPSGHLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMIKNEWFFSTYPLVPGHEIVGVVTEVGGKVEKFKIGDKVGVGCLVDSCRTCQNCSDNLESYCPQYTLTYGARYRDGTITYGGYSDSMVADEHFVVRIPEGLPLDAAAPLLCAGITVYSPLRYFALDKPGVHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPHKKEEAIKHLGADSFIISRDEDQMQAARGSLDGIIDTVFAAHPLLPLIDLLKSHGKLVMVGAPVKPLELLIFPLLIGRKIVAGSNIGGLKETQEMIDFAAEHNVKPDIEVIPIDYINTAMERLLKADVKYRFVIDIGNTLKPSF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01303 557 PANTHER ALDEHYDE REDUCTASE 144 192 IPR047109 GO:0016616
Spst2g01303 557 Gene3D - 363 519 - -
Spst2g01303 557 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 352 518 IPR036291 -
Spst2g01303 557 SUPERFAMILY GroES-like 215 380 IPR011032 -
Spst2g01303 557 SUPERFAMILY GroES-like 39 152 IPR011032 -
Spst2g01303 557 Pfam Zinc-binding dehydrogenase 390 513 IPR013149 -
Spst2g01303 557 Gene3D - 30 148 - -
Spst2g01303 557 FunFam Uncharacterized protein 212 362 - -
Spst2g01303 557 CDD CAD1 210 548 IPR047109 GO:0016616
Spst2g01303 557 Gene3D - 149 206 - -
Spst2g01303 557 FunFam Putative cinnamyl alcohol dehydrogenase 6 520 549 - -
Spst2g01303 557 SMART PKS_ER_names_mod 219 547 IPR020843 GO:0016491
Spst2g01303 557 Pfam Alcohol dehydrogenase GroES-like domain 44 124 IPR013154 -
Spst2g01303 557 Pfam Alcohol dehydrogenase GroES-like domain 234 347 IPR013154 -
Spst2g01303 557 Gene3D - 212 549 - -
Spst2g01303 557 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 145 194 IPR036291 -
Spst2g01303 557 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 267 281 IPR002328 GO:0008270|GO:0016491
Spst2g01303 557 FunFam Cinnamyl alcohol dehydrogenase 363 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01303 Spst-Chr2 11716140 11724276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01303 207 556 Monolignol Biosynthesis Gene Families AT4G37990 70.857 8.78e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01303 K23232 - gmx:100816901 603.594