Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01302 ATGTCGAACGTGTTAGCAGGAGATGAAAAGGATAAAGTTGCTACCTTTGGGTGGGCAGCTAGAGACGATTCGGGAATTCTCTCCCCATTCCACTTTACCAGAAGGGCAAATGGTGATAACGATATCACACTTGACATACTATTTTGTGGAATTTGCCACTCTGACCTCCACTTTCTGAAGAATGACTATGGAATGTCGATCTATCCAATGGTTCCTGGGCATGAGATCGTGGCTAAAGTGACAAAGGTGGGTAGCAAAGTCACAAAATTCTGTGTTGGGGACATAGCTGGTGTGGGTGGCACTGTGGGTTCATGTGGCTCATGTTCGAACTGCAGCGAGGGCTTCTATGTATATTGTCCAAAAATGATTTTAACCTACAGTGCACGCTACCATGATGGAACAATAACCCAGGGTGGGTACTCGGATAAGCTAGTGGTTGATCAGAACTTTGCGGTGCTAATCCCAAAGTCCATGCCACTAGCCGGTACGGCCCCGTTGATGTGTGCTGGAATCACAGTTTACAGCCCATTGAAGTATCATGGGCTTACCAAGCCAGGCTTGCACTTGGGTGTGGTGGGCCTGGGAGGCCTAGGTCACGTGGCTGTGAAGTTTGCTAAGGCTTTTGGAATGCATGTCACTGTGATTAGCACATCTCCCAGCAAAAAGAAGGAAGCACTGGAGAGGCTTGGTGCTGATGCATTCTTGGTTAGCCAAGACCAACAACAGTTGCAGGATGCCATGGGCACAATGGATGCCATTATTGACACTGTTTCAGCTAATCACTCCATCCAACCACTGATCGGTTTATTGAAAACAAGTGGAAAGTTGATTTTGGTGGGTGGACCAGCCTCTCCTCTTGAGGTTTTAGCCATGCCTTTGCTTTTGGGGAGAAAGATGATTGCTGGCAGTGCAGGAGGGGGGAGAGAAGAGATTCAAGAGATGATGAATTTCGCAGCAAAGCACAATATTACCGCAGATGTGGAAGTCATTCCAATGGAGTACGTGAACACTGCCTTTGAGAGACTGCAAAAGAATGACGAGAAATTGAGCGAGTAA 1056 0.4725 MSNVLAGDEKDKVATFGWAARDDSGILSPFHFTRRANGDNDITLDILFCGICHSDLHFLKNDYGMSIYPMVPGHEIVAKVTKVGSKVTKFCVGDIAGVGGTVGSCGSCSNCSEGFYVYCPKMILTYSARYHDGTITQGGYSDKLVVDQNFAVLIPKSMPLAGTAPLMCAGITVYSPLKYHGLTKPGLHLGVVGLGGLGHVAVKFAKAFGMHVTVISTSPSKKKEALERLGADAFLVSQDQQQLQDAMGTMDAIIDTVSANHSIQPLIGLLKTSGKLILVGGPASPLEVLAMPLLLGRKMIAGSAGGGREEIQEMMNFAAKHNITADVEVIPMEYVNTAFERLQKNDEKLSE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01302 351 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Spst2g01302 351 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Spst2g01302 351 SUPERFAMILY GroES-like 22 186 IPR011032 -
Spst2g01302 351 Gene3D - 18 348 - -
Spst2g01302 351 PANTHER ALDEHYDE REDUCTASE 12 348 IPR047109 GO:0016616
Spst2g01302 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Spst2g01302 351 Gene3D - 169 325 - -
Spst2g01302 351 CDD CAD1 16 346 IPR047109 GO:0016616
Spst2g01302 351 SMART PKS_ER_names_mod 25 349 IPR020843 GO:0016491
Spst2g01302 351 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01302 Spst-Chr2 11701559 11705057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01302 16 346 Monolignol Biosynthesis Gene Families AT4G37990 64.350 4.12e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01302 K23232 - gmx:100801089 582.408