Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01296 ATGGGTGATCAGGTTAGGTTCAACAACCCGAATGCAAAGCGTCCCCATTTCTCCACAGGGCTAGTGGGCGATGACAATGCCATAGCAAGACACGGCATCCATGGATTGTATAGCTTGTATACTGTTGTCGTCGATAGTAATCATTTGAGAAAAGGAATAAACATCATCTATTTGACACAGTCATTTGCCAAAAGTTCACTTGAAGGAGTTATGTATGATTATATTCGCTTAGAAATGTTATCTAATGAGAGTTTTGATTTTGAAACTGGGCAAAAAGACCTGTTACAAGCTAGCCATGGGGGCAATGAAAAAGAGTTTATTGGGTAG 327 0.4006 MGDQVRFNNPNAKRPHFSTGLVGDDNAIARHGIHGLYSLYTVVVDSNHLRKGINIIYLTQSFAKSSLEGVMYDYIRLEMLSNESFDFETGQKDLLQASHGGNEKEFIG 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01296 108 SUPERFAMILY Galactose-binding domain-like 4 78 IPR008979 -
Spst2g01296 108 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 4 79 - -
Spst2g01296 108 Pfam Polysaccharide lyase family 4, domain III 4 77 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01296 Spst-Chr2 11626197 11633963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01296 4 78 Polysaccharide Lyase AT4G38030 62.667 8.51e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01296 K18195 - gmx:100781089 113.235