Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01290 ATGTCCATGATATATGGTTATGATTTTACTGTCACTGCAAGCTCTATTCTGCAATTGATGGGAGAACAACTTTATGGTCTGAATGTCAGAGACCTACAAGATCTAGAGAACCAACTGGAAATGAGCCTCCAAGGTGTCCGTATGAAAAAGGAACAAATTCTAAAAGATGAAATCCAAGAGCTGAACCGAAAGGGAAACCTTATCTTCCAGGAAAATGTGGAACTTTACAAGAAGGTCTATGGTACAACAGATATAGCCACAACAAGCAGAAATGCATTTGTTCCACTTCCATATGGTATGCATGCAGGATGGTGTCCACAAGAATTGATCCAACTTCAGTTATGCCAGCCTGAACAAGAAGCTTGTGATACATCAGACACTGCCACAAAGTAA 393 0.402 MSMIYGYDFTVTASSILQLMGEQLYGLNVRDLQDLENQLEMSLQGVRMKKEQILKDEIQELNRKGNLIFQENVELYKKVYGTTDIATTSRNAFVPLPYGMHAGWCPQELIQLQLCQPEQEACDTSDTATK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01290 130 Coils Coil 32 52 - -
Spst2g01290 130 ProSiteProfiles K-box domain profile. 1 85 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst2g01290 130 Pfam K-box region 15 79 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01290 Spst-Chr2 11524433 11526039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01290 18 128 MADS-box Gene Family AT2G22630 46.400 3.94e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01290 K09264 - gmx:100778427 203.371