Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01255 ATGGCCTCAGATGCTTTTAATTTCAATGACAAGAACATCGTGTTTCGGAAACTCAAGGCAAAGTCTGAAAACAAGATGTGCTTCGATTGTAACGCAAAAAATCCAACTTGGGCCTCCGTCACCTATGGCATCTTCCTCTGCATCGATTGCTCTGCTGCACATCGTAGTCTTGGTGTCCATATCAGTTTTGTCAGGCAAGTTATAATCATTTTCACTGTTCTTTCATGTATTCGCAACTACATATTCCGACGTCATGTTCTCTGTTTAATATTTGCCGTAGCTTGA 285 0.4105 MASDAFNFNDKNIVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAAHRSLGVHISFVRQVIIIFTVLSCIRNYIFRRHVLCLIFAVA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01255 94 Gene3D Arf GTPase activating protein 3 72 IPR038508 -
Spst2g01255 94 SUPERFAMILY ArfGap/RecO-like zinc finger 14 68 IPR037278 -
Spst2g01255 94 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 67 IPR001164 GO:0005096
Spst2g01255 94 Pfam Putative GTPase activating protein for Arf 14 67 IPR001164 GO:0005096
Spst2g01255 94 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Spst2g01255 94 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Spst2g01255 94 SMART arf_gap_3 12 93 IPR001164 GO:0005096
Spst2g01255 94 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 7 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01255 Spst-Chr2 11113206 11113566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01255 16 69 C2H2 Transcription Factor Family AT4G21160 48.148 1.24e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01255 K12493 - twl:119987447 126.716