Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01236 ATGGCCCCTTCCTTCGACACAACCACTCACACAGTTTGCGTCATGGACGCTTCCGGCCACCTCGGCTTCACCCTCGTCCAGAGACTCCTCCAAAGGGGCTACAACGTCCATGCCTCTGTCCAAAAATATGGCCACGAAGACCTATTCAATGGGATTTCCACTGATCCTAATAAGCTCAAGGTTTTTCGATCTGATCCATTTGATTACCATAGCATAATCGACGCACTCCGAGGCTGCTCTGGTTTGTTCTACACCTTCGAACCTCCCCATGACCAACCAAATTATGATGAATTCATTGCAGACGTGGAAGTAAGAGCTGCACACAACGTGCTCGAAGCCTGTGCACAGACAGAAACAATAGATAAAGTGGTTTTCACTTCCTCAGCAACCGCAGTGGTTTGGAGAGAGGATCGCAAGAACATTGAACTGGATCTAGACGAAAGACATTGGAGTGATGTAAATTTTTGTCGCAAATTCAAGTTATGGCATGGCGTGTCGAAGACAATGTCTGAGAAAAGTGCGTGGGCCTTGGCAATGGACAGAGGAGTGAATATGGTGTCCATAAACGCAGGATTATTGATGGCTCATGATCTCTCCATCCAACATCCTTACCTCAGAGGAGCCGCTGAGATGTACGAGGATGGTGTTTTCGTGACCGTTGATTTACATTTCTTGGTGGATGCCCACATATGCGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCGCATCATCAACACCCACGACGACGCTGTTCAACTAGCGCGCAAGTTGACCCCTGCTGCTTCCTCCTCCGCGCCGCAAAGTGACGACCACGGTAAGGGTTTTATCGAACAGAAAATTAGCAACAAAAAGTTAAATAAATTGATGGTGAACTTCGAGGCTTGA 900 0.4756 MAPSFDTTTHTVCVMDASGHLGFTLVQRLLQRGYNVHASVQKYGHEDLFNGISTDPNKLKVFRSDPFDYHSIIDALRGCSGLFYTFEPPHDQPNYDEFIADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKNIELDLDERHWSDVNFCRKFKLWHGVSKTMSEKSAWALAMDRGVNMVSINAGLLMAHDLSIQHPYLRGAAEMYEDGVFVTVDLHFLVDAHICVYEDVSSYGRYLCFNRIINTHDDAVQLARKLTPAASSSAPQSDDHGKGFIEQKISNKKLNKLMVNFEA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01236 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 154 IPR002225 GO:0003854|GO:0006694|GO:0016616
Spst2g01236 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 290 - -
Spst2g01236 299 Gene3D - 4 299 - -
Spst2g01236 299 CDD FR_SDR_e 12 295 - -
Spst2g01236 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 264 IPR036291 -
Spst2g01236 299 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01236 Spst-Chr2 10936069 10938511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01236 10 297 Monolignol Biosynthesis Gene Families AT5G58490 31.511 8.63e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01236 - - gmx:100793329 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01236 2 10936069 10938511 Spst2g01236 2 10936069 10938511 ECH