Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01231 ATGGGTAGATCACCGTGTCGTGAGGAGATTAGTGGTGTAAAGAAAGGACCATGGACACCAGAAGAAGATGAGATGCTGATTGATTATATCAGCAAACACGGCCATGGCAGTTGGAGAACACTTCCAAAGCGTGCAGGGCTCAATAGGTGTGGTAAGAGCTGCAGATTAAGGTGGACAAACTATCTGAGGCCTGATATCAAGAGAGGCCAATTCACTGAAGAAGATGAGAGAATTATCATCAACCTTCATTCAGTTCTCGGAAACAAGTGGTCGAAGATTGCAGCCCATCTGCCAGGACGAACTGATAATGAGATCAAGAATTATTGGAACACTCACATAAGGAAAAAGCTTCTAAAGATGGGTATCGATCCAGAAACTCATAAGCCAAGGACAGACTTGAATCACCTAATGAGTCTTTCTCAGTTGCTTGGCATGTCAAACTTGAGCAGTGTTATGAGTACTACTTGGGGCAGTAACCCTCTTGGTTTACAACCAGATATCACTCAGCTAACCAAAATACAACTGCTGCAAAATCTTCTGCAACTTATGAACAGCAATTCAGTTGTTAACATGGGTAACCCTTACCTCTTAGGCAATCTCAATCTCAACCCTTTATTTCTGAACGGCACAAACCCCCTCCAAACAAAGGAGCCTGTGGTGTTGAGTGGTAGTCAAGGATTTGCTAACCCTAGTGTGTACTCTCAAGTACAAAGCGAGTGCTCTCAGCAGGATGCTACAAAATCATTGACAGATGTGGAGGGTGGATCCATTCCAAAAGGTCCTGATTACAACAAAATTAGCAGCACTAATCATTCACGAGAAAATCAAGCAGAAAACCCTCTTCCTGCATTAGTTGCAGCCTCTCCGAGGATGGGAACCTTCAACCCAATGAACAGTGGTTGTGATAACTTAGCTCAAACGTGCACAGAGTCACCTTCCAACACATTCTTTGATGATTGGGAGAAGTTGCTTGACGATGAAACTAGCGGTTCCTATTGGAAAGAAATTCTAGACTTTACCTCCACTTCTTCGACACCAATTATGTGGTAG 1050 0.4343 MGRSPCREEISGVKKGPWTPEEDEMLIDYISKHGHGSWRTLPKRAGLNRCGKSCRLRWTNYLRPDIKRGQFTEEDERIIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTHIRKKLLKMGIDPETHKPRTDLNHLMSLSQLLGMSNLSSVMSTTWGSNPLGLQPDITQLTKIQLLQNLLQLMNSNSVVNMGNPYLLGNLNLNPLFLNGTNPLQTKEPVVLSGSQGFANPSVYSQVQSECSQQDATKSLTDVEGGSIPKGPDYNKISSTNHSRENQAENPLPALVAASPRMGTFNPMNSGCDNLAQTCTESPSNTFFDDWEKLLDDETSGSYWKEILDFTSTSSTPIMW 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01231 349 FunFam MYB-related transcription factor 14 67 - -
Spst2g01231 349 CDD SANT 71 113 IPR001005 -
Spst2g01231 349 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Spst2g01231 349 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Spst2g01231 349 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Spst2g01231 349 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Spst2g01231 349 SMART sant 14 64 IPR001005 -
Spst2g01231 349 SMART sant 67 115 IPR001005 -
Spst2g01231 349 MobiDBLite consensus disorder prediction 250 279 - -
Spst2g01231 349 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Spst2g01231 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Spst2g01231 349 Gene3D - 69 136 - -
Spst2g01231 349 MobiDBLite consensus disorder prediction 262 277 - -
Spst2g01231 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 264 - -
Spst2g01231 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Spst2g01231 349 FunFam Transcription factor MYB39 70 131 - -
Spst2g01231 349 Gene3D - 14 67 - -
Spst2g01231 349 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01231 Spst-Chr2 10868411 10870211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01231 1 338 MYB Transcription Factor Family AT5G16770 46.132 1.77e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst2g01231 Myb_DNA-binding 9.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01231 K09422 - gmx:100810159 548.895