Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01223 ATGACATTGGTTATCAGAGAGAGGAGACACAAGCAAGCTCTAAGGCTTTCATTGCCAAAAACTCCTTCAAATCCATCACATTCTGATTTCCCAAACCAAATTCACGTGCCAGCAGTTCTGTCATCCCCATCTTCCCATGTAGACTCTTCTCCAGGCATCATCAAGGACCTTTCGGACCTTAAGAAGCTATCAGTTCTCGGCCATGGCAATGGTGGCACAGTCTACAAAGTTTATCACAAGAATACCCGTTCCTTCTATGCCTTGAAAGTGCTACGGTTGAATGAGAACGGCCTTGGCATTCGCCAACCTGCTACACTCGAGGCTGAGATTCTAAAACGTGTGGATTCACCATACATAGTGAGGTGTCATGCAGTTTTTGACAGTGGTAACTGTAATAATGATGGTGACAACGGAGGTGATATTAGCTTTGTTATGGAATACATGGAAGGAGGGTCTTTGCATGATGTGTTGAGAGAACACCACAGACTGTCAGAAGAGGTTATCTCGGTGTTGGCTTGGCGCGTTTTGGAAGGACTTCAGTATTTACATGGCATGAATATTGTGCATAGAGATATTAAACCATCAAACTTACTTGTGAACGATAGATTGGAGGTAAAGATTGCAGATTTTGGGGTGAGTCATGTGGTGGAAGGTAGGTTTGAAGGAAATGACTATGATGCAGGCACTTGTGCTTACATGAGTCCGGAAAGGGTTGATCCAGAAAGATGGGGTGGTGAAAATGCAAATGAGTTTGCAGGTGATGTATGGTCAATGGGAGTAGTAATGTTGGAATGCCTTTTGGGTTGTTTTCCATTGATTGGTCCAGGGCAGAGACCAGATTGGGCAACTTTGATTTGTGCAATTTGCTTTGGTGAGAAGCTGGAGATGCCAGAAAAAGCATCACCAGAGTTTCAAAATTTTGTGAGGAGGTGTCTTGAGAAGAATTGGAGGAAGAGAGCAACAGTGTTAGAACTTCTTCACCACCCTTTTGTGACTCGGAAAAATTGTTGCTCTTCTGATAAAGAGCTTGGCGATTATGTTCTTGGAGGACGTTAA 1056 0.4356 MTLVIRERRHKQALRLSLPKTPSNPSHSDFPNQIHVPAVLSSPSSHVDSSPGIIKDLSDLKKLSVLGHGNGGTVYKVYHKNTRSFYALKVLRLNENGLGIRQPATLEAEILKRVDSPYIVRCHAVFDSGNCNNDGDNGGDISFVMEYMEGGSLHDVLREHHRLSEEVISVLAWRVLEGLQYLHGMNIVHRDIKPSNLLVNDRLEVKIADFGVSHVVEGRFEGNDYDAGTCAYMSPERVDPERWGGENANEFAGDVWSMGVVMLECLLGCFPLIGPGQRPDWATLICAICFGEKLEMPEKASPEFQNFVRRCLEKNWRKRATVLELLHHPFVTRKNCCSSDKELGDYVLGGR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01223 351 FunFam Mitogen-activated protein kinase kinase 1 40 149 - -
Spst2g01223 351 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 14 334 - -
Spst2g01223 351 Pfam Protein kinase domain 61 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01223 351 PRINTS Tyrosine kinase catalytic domain signature 181 199 IPR001245 GO:0004672|GO:0006468
Spst2g01223 351 PRINTS Tyrosine kinase catalytic domain signature 253 275 IPR001245 GO:0004672|GO:0006468
Spst2g01223 351 PRINTS Tyrosine kinase catalytic domain signature 145 158 IPR001245 GO:0004672|GO:0006468
Spst2g01223 351 Gene3D Phosphorylase Kinase; domain 1 44 145 - -
Spst2g01223 351 Gene3D Transferase(Phosphotransferase) domain 1 146 345 - -
Spst2g01223 351 CDD PKc_MAPKK_plant_like 58 338 - -
Spst2g01223 351 SMART serkin_6 60 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01223 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Spst2g01223 351 ProSiteProfiles Protein kinase domain profile. 60 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01223 351 SUPERFAMILY Protein kinase-like (PK-like) 34 335 IPR011009 -
Spst2g01223 351 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01223 Spst-Chr2 10815972 10817027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01223 1 334 MAP Kinase Kinase Gene Family AT1G32320 52.836 5.79e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Spst2g01223 Pkinase 8.5e-61 CL0016