Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01212 ATGGAGCTTTTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCGAACACCAAACCAACATCAAGTTGGAGGAGAAGCACGGAAGAAGACATGGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCGAGAAACTCCATATCATCAATGGCCAAACAAGACTCTTGCTTCGACCTCTCCCTCTCCAATCCAAAAGCCTCAGATAACTCCAACTCCTCCAACCTCATTCACCACTTCCAAAACGGTGCCAGTAATGCCACCACCAACTCCTTCCAACCCTTTCAGCAAAACCATTACTTCCACCAGCCACTGTTCCAGCCTCAGCACCAAAGCCTAAGCCAAGACCTCGGCTTTCTAAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACTCAACACCACCACCATCATCATCATCATCTCCCTCTAGAGGCTTCCACCACCACCCCTTCTTCTATTATTTCCAGCGCAAACACTGGTTCTACCCCTTTCCACTCTCAGGCGCTTATGAGATCAAGATTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCGAGGATGCGTTGGACTTCTACTCTCCATGCTCGATTTGTTCATGCGGTTGAACTCTTAGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCCGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGTTCGTCTGGAGATACTTCTGATGACTTAATGTTTGATATAAAATCTTCTAGAAGGTCTGATGTATCCATTAAGCAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATCATGGTCTTTGGGGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGACTGATTCTGTTGGAAACGTGGCTTGTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAAAGGATATCAGATGGAAGCTCATCCTCAAATGTTTCAGGATCAAGCCCGAAGAAGCCTAATTTGGATTTAGAATTCAGCTTGGGGCAGCCACTTTAA 1125 0.4631 MELFPAQPDLSLQISPPNTKPTSSWRRSTEEDMDLGFWKRALDSRNSISSMAKQDSCFDLSLSNPKASDNSNSSNLIHHFQNGASNATTNSFQPFQQNHYFHQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHHHHHHLPLEASTTTPSSIISSANTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDVSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKTDSVGNVACLEKEMDPKCLSYERISDGSSSSNVSGSSPKKPNLDLEFSLGQPL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01212 374 MobiDBLite consensus disorder prediction 252 277 - -
Spst2g01212 374 MobiDBLite consensus disorder prediction 343 374 - -
Spst2g01212 374 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Spst2g01212 374 MobiDBLite consensus disorder prediction 344 362 - -
Spst2g01212 374 MobiDBLite consensus disorder prediction 1 29 - -
Spst2g01212 374 MobiDBLite consensus disorder prediction 252 276 - -
Spst2g01212 374 FunFam Myb family transcription factor 192 250 - -
Spst2g01212 374 Gene3D - 193 250 - -
Spst2g01212 374 NCBIfam myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Spst2g01212 374 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 373 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01212 Spst-Chr2 10729287 10733575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01212 1 373 G2-like Transcription Factor Family AT4G17695 38.265 4.70e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g01212 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01212 - - gmx:100798081 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01212 2 10729287 10733575 Spst2g01212 2 10729287 10733575 ECH
Spst2g01212 2 10729287 10733575 Spst3g03548 3 85485726 85490189 PCT