Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01210 ATGGCAAACAAGGTGTTTGCTAGAAGATATTGCAGTGCTGGATGCCTTCCTGCCACATACTTGGAAAAAGAGTTTTGGAATGAAATTGGTTGTGGGAAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCCATCGACCAGCTTGGGAACAGCAAATGGAATTTGAAGGGAGTAACAGAACCTATGCTGTACATTGGAATGCTTTTTAGTATGTTTGCATGGCATGTGGAAGATCATTATTTGTACAGCATTAATTATCATCATTGTGGGGCATCGAAAACATGGTATGGTATCCCAGGTCATGCTGCTTTAGAATTTGAAAGGGTAGTCAGAGAACATGTGTACACTACTGATATTTTATCAAGTGACGGGGAAGATGGCGCCTTCGATGTTCTCCTAGGGAAAACAACTCTATTTCCACCAAATATTTTGTTAGAGCATGAAGTCCCTGTCTACAAGGCTGTTCAAAAGCCAGGGGAGTTTATAATAACCTTCCCCAGAGCATATCATGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCGTTAGGGGCTATTGCTAGCAGAAGATATGCACTTCTTAACAGGGTTCCTTTACTTCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTCGGACATGCTTGGAACTTGAAGATTCAGATTTTCCCTCTTCAGAATTTTTTTCTCATAATAGCATTAAGATTTCATTTGTTAACTTGATGCGATTCCAGCATTGTGCACGATGGTTTCTAACGAAATCAAGGGCTTGTCTAAGTGTCTCTTCTCATTCCCATGGCACGATTCTCTGTAGCCTTTGCAAACGTGATTGTTACATAGCTTATGTTGACTGCAACTGTCACACGCATCCTGTATGCCTACGTCACGATGTTGATTCTCTTGACTTCACCTGTGGGGGAAAATACACACTTTATTTGAGGGAGGATATAATGGAATTGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGACAGGATATCCAATGAGATAAGGAAGCAAACAAAAAGTGGCCAAAACATGTATGCACATCCTTTGTCAAATATGTTTGAGAGAGCCGAGGCAAATGGATACACGCCTTATTGTGAGCTAAAACTTGATTCTGTTATTGAATTTTATACTACTCCAGAGCACTCAACAAATACACTAGAATACAGTACACAGAATCAATCTGTCTTTGTACATTGCTCTGAAAATAAAAAACCCGTGGTGTCTGAGGTTTCATTTTCTTCAGCCACATCTACTCTTTCTGAATCTCTTGAGAGCTTCTCTACTCCTAAAAATGCTGAGGGGCATACCAATATCAACTTAGGTATTGTTGATTTTGAGGAGTTTGGTGAAAGAATATCCAACAGTGCATGTGAATCTTCATTATCTCCCGCTGTGTGCTATGAAAGCTCGGTTAAACCACAGGGGGTTCTTCAGAGATTTGATACAAAGCCCATCGCGGACGAGAGCGATGATTCCGATTCGGAGATATTTAGGGTAAAGCGCCCTTCTTCTCTGAAAGCAGAGAGGAGAAATATGAATGATGCTATGTCGTCAAAGCATGCTGAGCAGCATCAGGGACTAAAACGACTGAAGAAATTCCTTCCTGAAGGAAAGAGTGATCAACCGATGGATTTGAGCAGAACCCATGAATCAAGTTACAAATACAGTCATCCTCTTAACCATAAAGGTCGTGTTGAAGTCTCCTCCAGGGACAGATTTGCAAGGGGTAATGGCATTCCCATTTCTATAAGATATAAGAAGTTAGGGAACGAGGAAATAAGTATGCAACGAGATCACCACCAACACCGGAAAGATAGGTTGTTGCAGCAACAGACATTTAGGGAACCGCCTTCCATTGAGATTGAGCCAAAGCGCCTTAAAAGAGAGTACATGAGTAACAAAGAAGAGAAAAGTGGAGAGGATTCGGAGATTCAAACCTTCACTTACCATAATGTTAGAGACTATTCCTTAAGACCTAATCCCTCTGCTGCAAAATCTTTGAAGTAG 2073 0.4124 MANKVFARRYCSAGCLPATYLEKEFWNEIGCGKMETVEYACDVDGSAFSSSPIDQLGNSKWNLKGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALEFERVVREHVYTTDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLLRTCLELEDSDFPSSEFFSHNSIKISFVNLMRFQHCARWFLTKSRACLSVSSHSHGTILCSLCKRDCYIAYVDCNCHTHPVCLRHDVDSLDFTCGGKYTLYLREDIMELEAAAKMFEQEDRISNEIRKQTKSGQNMYAHPLSNMFERAEANGYTPYCELKLDSVIEFYTTPEHSTNTLEYSTQNQSVFVHCSENKKPVVSEVSFSSATSTLSESLESFSTPKNAEGHTNINLGIVDFEEFGERISNSACESSLSPAVCYESSVKPQGVLQRFDTKPIADESDDSDSEIFRVKRPSSLKAERRNMNDAMSSKHAEQHQGLKRLKKFLPEGKSDQPMDLSRTHESSYKYSHPLNHKGRVEVSSRDRFARGNGIPISIRYKKLGNEEISMQRDHHQHRKDRLLQQQTFREPPSIEIEPKRLKREYMSNKEEKSGEDSEIQTFTYHNVRDYSLRPNPSAAKSLK 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01210 690 MobiDBLite consensus disorder prediction 525 579 - -
Spst2g01210 690 Pfam JmjC domain, hydroxylase 70 193 IPR003347 -
Spst2g01210 690 SUPERFAMILY Clavaminate synthase-like 50 226 - -
Spst2g01210 690 Pfam C5HC2 zinc finger 290 341 IPR004198 -
Spst2g01210 690 Gene3D Cupin 1 239 - -
Spst2g01210 690 MobiDBLite consensus disorder prediction 650 665 - -
Spst2g01210 690 PANTHER LYSINE-SPECIFIC DEMETHYLASE 2 606 - -
Spst2g01210 690 MobiDBLite consensus disorder prediction 650 690 - -
Spst2g01210 690 ProSiteProfiles JmjC domain profile. 40 210 IPR003347 -
Spst2g01210 690 SMART cupin_9 45 210 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01210 Spst-Chr2 10700773 10710862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01210 55 224 C2H2 Transcription Factor Family AT5G04240 46.809 5.43e-50 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst2g01210 JmjC 1.3e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01210 - - gmx:100798611 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01210 2 10700773 10710862 Spst2g01210 2 10700773 10710862 ECH