Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01209 ATGCTTGAAACTCTCGAGAAAATGTATCTTCTTCTGCTCTTCCTTCAGATCTCGGACATTGTTACTGTGGAAAGAAGAGTGACTTTATCTAAGGAGGTGAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCAAAATCCGTCACTGCCAGCCAGACAAATATTGCTAACATGATGAACAGAAGTGGAGGAGATGCTTTAAGAGCTTCATCATCATGTGGCATGAGATTGCATGGTAATGCTGATGTCTTTTCCAAACGCAAGGTGGAAAAGTTTGATACAAATGACCTGAACTGGACTGATACAATTCCAGAGTGTCCTGTGTATTCTCCAACAAAAGAGGAATTTGAGGATCCTTTGATTTATTTGCAAAAGATAGCTCCAGAAGCTTCTAAATATGGTATTGAGTTTTGCATGGCAACGTTTTCCAGTGCTTGCACTTTAAATCTGGCTTTTGGGTGTGTTGGGAGGGAGGGTGTTGATCACGAGTATTCTGTATTATCTCGTCCTGAAATCTTTGTTGTGAATGAGAGGATTATCATTGGTTATTTGGAATTTGATAGTGAAAGTATATGCAAGATTGTTTCTCCTTTGAGTGCTTCAGTACCTGCTGGGGTTGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACGACTAGAGTGCAGCCTCTTCGCCTTGCTGAATGGGATTCTGAAGATAAAGTCACATTTTTTATGAGTGGAAGGTCAGTTTCCCTGCTTAGCATTGCGTAA 762 0.4029 MLETLEKMYLLLLFLQISDIVTVERRVTLSKEVRNGLEFLKRKRLQRAKSVTASQTNIANMMNRSGGDALRASSSCGMRLHGNADVFSKRKVEKFDTNDLNWTDTIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGIEFCMATFSSACTLNLAFGCVGREGVDHEYSVLSRPEIFVVNERIIIGYLEFDSESICKIVSPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDSEDKVTFFMSGRSVSLLSIA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01209 253 SMART JmjN_1 108 142 IPR003349 -
Spst2g01209 253 PANTHER LYSINE-SPECIFIC DEMETHYLASE 102 249 - -
Spst2g01209 253 Gene3D Cupin 95 253 - -
Spst2g01209 253 ProSiteProfiles JmjN domain profile. 109 150 IPR003349 -
Spst2g01209 253 Pfam jmjN domain 110 138 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01209 Spst-Chr2 10698521 10700695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01209 101 138 C2H2 Transcription Factor Family AT5G04240 50.000 1.42e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst2g01209 JmjN 9.4e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01209 - - mnt:21400731 221.861