Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01198 ATGGCACCATCACCAACGGATTCAGAACAAGAATCTGAAGCGCTGCGCCTCAAGGCGATGGCAGAGTCTAAGTTCAGAGCCTCCAACAACGCCAAATCCGCTCTCAGATACGCTAAGCGCGCGCAGAGTCTGTGCCCGCACCTCGCCGGCGTGTCGGAGGTCGTGACCTCGCTCACCGTCGTCGCCGCGCCGGACTGGTACAGCGCTCTGGGCGCGGAGCCCTTCGCGAACAGCAGCGTCATTCGGAGACAGTACAAGAAACTCGCGCTGCTCCTCCACCCCGACAAGAACCCCAACGTGGCGTCCGAGGAGGCCTTCAAGCTCGTCAGCGAGGCCTTCCACCTCCTCTCCGATAGGAGTCGCCGCCGGGAGTACGACGCCGAGCTCCGGCGGAGAATCGAGGCGGAGAACGAGACGTTCTGGACCGCCTGCTCTACTTGTCGGCTCCTTCACCAGTTCCAGAGAAGGTACTTGGGTCACGAATTGGTGTGTCCGAGTTGCGAGAAGAGTTTTAAGGCGGTGGAAACGGTTCAGAGTGATGGAGATGGTGATGGGGAAGTTAGGGTTAGGAGTAGGAGGTTGAAGCTGAAAGAGATAAATAAGAAGGAGAAAATTGGTGTGAGAGGGAAAGTGGGAGATGAAGTGAGGGATGAGAAGGAAGGAAAATTAAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCCAAACCTAGTAAGAGGGTTAAAAATGGGGAAGAAATGATGACATTGGCTGAATTTCAGAATGAGGTGAGGAGAAAGTTTCAGGAAAAAAAACTGCAGAAAAAAGAAAAGGAAAAGGAAAAAGAGGAAGACAGGATTGAGAAGAGGAGCAACCGGGGAGAGAGGCGGCGGGGATTGAGAAACAATGGAGGTTTAGAGGTTGGAGAAGTGAGGGATTTGAAGAAAAGTATGAAGCTTGCAGTTGAGGAGAAGCGTGGGGGTTTAGAGAGTAGGAAGGGGTTGAGAATTGAGAAGCAGAAGGATTCTGATAGAGGGGAGTTAGAAAATATGGCGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTTAAGAAAGGTCAAGTGTGGGCAGTATATGACGATGATGATGGAATGCCAAGGAATTATGCCTTGATTGATGGAACTCTTTCCGTGTATCCTTTTGAAGTGAGATTAAGTTGGTTGGATGTACAAAACAGTGGGGATGGGAAGATAGTTAGTAGGGAGAAAATGGGATTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCTGTGAATTCGGTAAATATATTTTCTCATGTTGTGAATTGTGACCGGGCAGCACGTGAAATTTACAAAATTTACCCCAAGAAAGGCTCGGTATGGGCGCTTCATGGTGAGGGAAGTAATGATGCAGAGGAGGGCAAGAGATGCTATGATATTGTTGTATGTCTGACAAGTTACAGTGAGGTGAATGGTCTGAGCATGGCGTATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAAGCGGCAAGAGAAGGGGAGTGCTGCTATTAGATTTCTTGGGAAGGATGAGATGTGGTTAGTTTCTCATCAGATTCCTGCACGGAAGCTTCTTTGTGATGAAACTCCTGAACTGTTGAAAGACTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTGGCATTAATAATTGA 1728 0.4826 MAPSPTDSEQESEALRLKAMAESKFRASNNAKSALRYAKRAQSLCPHLAGVSEVVTSLTVVAAPDWYSALGAEPFANSSVIRRQYKKLALLLHPDKNPNVASEEAFKLVSEAFHLLSDRSRRREYDAELRRRIEAENETFWTACSTCRLLHQFQRRYLGHELVCPSCEKSFKAVETVQSDGDGDGEVRVRSRRLKLKEINKKEKIGVRGKVGDEVRDEKEGKLRKRMRSVGEVLERSKPSKRVKNGEEMMTLAEFQNEVRRKFQEKKLQKKEKEKEKEEDRIEKRSNRGERRRGLRNNGGLEVGEVRDLKKSMKLAVEEKRGGLESRKGLRIEKQKDSDRGELENMAVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDGTLSVYPFEVRLSWLDVQNSGDGKIVSREKMGFHIPCGRFKVARKTSVNSVNIFSHVVNCDRAAREIYKIYPKKGSVWALHGEGSNDAEEGKRCYDIVVCLTSYSEVNGLSMAYLEKVDGYKTVFKRQEKGSAAIRFLGKDEMWLVSHQIPARKLLCDETPELLKDCWELDPASLPSDLLTIGGINN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01198 575 Coils Coil 252 288 - -
Spst2g01198 575 MobiDBLite consensus disorder prediction 218 244 - -
Spst2g01198 575 Pfam DnaJ domain 65 126 IPR001623 -
Spst2g01198 575 CDD DnaJ 65 118 IPR001623 -
Spst2g01198 575 PRINTS DnaJ domain signature 67 85 IPR001623 -
Spst2g01198 575 PRINTS DnaJ domain signature 101 121 IPR001623 -
Spst2g01198 575 PRINTS DnaJ domain signature 85 100 IPR001623 -
Spst2g01198 575 MobiDBLite consensus disorder prediction 264 299 - -
Spst2g01198 575 Pfam Domain of unknown function (DUF3444) 345 544 IPR024593 -
Spst2g01198 575 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Spst2g01198 575 Gene3D DnaJ domain 55 147 IPR036869 -
Spst2g01198 575 SUPERFAMILY Chaperone J-domain 57 130 IPR036869 -
Spst2g01198 575 SMART dnaj_3 64 121 IPR001623 -
Spst2g01198 575 PANTHER BNAC03G44070D PROTEIN 10 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01198 Spst-Chr2 10589872 10591599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01198 7 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.198 1.76e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01198 - - ccaj:109800659 846.269