Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01177 ATGGCAGATAGTTCAGTATCGTTTTTGCTGGACAAGCTAAGTTCTCTGCTTCAAGAAGAAGTGAATCTGCAGAGAGGGGTTCGTGAAGATGTTCAGCACATCAAATACGAACTTGAACGTCACAAGGCTATCTTAAGGATGGCTGATGCTATGGAAGACAAAGACCCTGAACTCAAAGCATGGGTTAAACGAGTGAGAGATGTTGCTCATGACATGGAAGATGCTATAGACGAATTCAACCTTCGCCTTGTCGAGCAACATGGACAAGGAAACAATTCTTCTGTTCATAGGTTTACTTTCGGCCTTAAGACAATGAAAGCTCGGCATAGAATTGCTTCAGATATGCAAAGCATCAAAACCAAAGTGAACGTTATATCCCAGGGACGTCCAGACCTATCTGGGATAGGCTCAGGGTCAAGTCAACGGCTAAGGCTTGATAGCCAAGGAGATGCACTTCTGCTAGAAGAAGCTGATCTAGGCTGTGATTCCAATATATGGAATGGGGGGTTGGGGAAAACCACCTTGGCAAAACAAATCTACGATGATCCAAATGTGAAGAAGCGTTTCAGGATTCATGCTTGGATTAACGTTTCTCAGTCTTTTAAACTGCAAGAGCTCCTTAAAGACCTGGTTCAACAGCTCCATAATGTCATTGGGAAACCGGCTCCGGAAGCAGTTGGGCAAATGAAAAGTGACGAGCTCAAAGATATGATCAAGAACTTGCTTCAGAGAAGCAGGTACCTCATTGTGCTGGATGATGTGTGGCTTGTAAGGGTATGGGATTCTGTCAAACTTGCTTTGCCTAATAACAACCGTGGCAGTAGAGTGATGCTTACAACACGCAAGAAAGATATAGCTTTGTATTCTTGTGCTGAATTGGGTAAGGATTTTAACCTTGAGTTCTTACCTGAGGAAGAAGCTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGTAACTCATGTCCTCCTCATCTGGAGGAAGTTTGCAGGAAGATCTTAAAAATGTGTGGTGGGTTGCCACTAGCAGTTGTTGCAATTGGTGGTGCTTTGGCTACGCGAGGGAGGGCAAACATAGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTAAGTTTCAATGAGTTGCCTTACTATCTTAAATCCTGCTTGTTGTACCTAAGCATCTTCCCTGAGTTTCATGCTATTGAGCATATGAGATTGATTCGATTGTGGATAGCTGAAGGTTTTGTGAATGGAGAAGATGGAAAGACAAGGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTTGTAGCAAAAACCAGTGATGGAAGGATGAAGACTTGTCGCATGCATGATCTTCTAAGGGAGATCGTCAATTTAAAGGCAAAGGATCAAAACTTTGCCACAATAGCCAGAGATCAAGACATAATCTGGCCAGACAAAGTTCGACGCCTGTCAATCATAAATACATTGCAAAATGTGCAACAAAATAGGGCTTCATTCCAGCTCCGATCTCTGCTAATGTTTGCCTTATCAGATTCACTGGACCATTTTTCTATACGTTCATTATGTTCCACTGGTTATAAGTTAATCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTAAGCCTTTACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTACCATAAAGAAGCTGCAGCAACTGGAAACATTAGATCTTAAACATTCCTCTGTCACAGTATTGCCAGTTGAAATTGTGGAGCTGCAACGATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCCTATGCTTATTTCCATTCAAGGCACGGCTTCAAGGTGGCTGCCCCTATAGGAATGATGCAATCTTTGCAAAAGCTATGTTTTATAGAGGCAGACCAGGCTTTGATGGTTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATTAGAAAGATGAGGCAACAAGAGGGCGCTGCTTTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCATTGTCCATCACAGCAATTGAAGATAATGAGATAATTGATATTCACAACATTTTCAGCCCTCCTCGGTATCTCCAGCAGTTATATTTAAGTGGACGTTTAGACAATTTTCCCCACTGGATAAGTGCTCTCAAGAATTTGGTCCGAGTGTTTCTAAAATGGAGTCGGCTAAGAGAGGATCCTCTGTTACATCTCCAAGATTTGCCAAATCTAAGACATCTTGAGTTTCTTCAAGTTTATGTAGGTGAGGCATTGACTTTCAAGGCTAAGGGGTTTCCTAGTCTGAAGGTGTTAGGCCTTGATGATTTAGATGAACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGCGGTTCACTAAAGCAGGTACCCTTAGGCATTGAACATCTAACCAAGCTAAAATCAATTGAGTTTTTTGACATGCCTGAAGAATTGATCGCAACACTGCATCCAAGTGGAGGTGAGGAATATAAGAGAGTACAACATGTCCCAGCAGTTTATTCCTCATATTGGAGGGATGGAGGTTGGGATGTCTACTCATTAGAGACTTTAGCAGATCGAGAGACTGATCTCAGTGGCGGTACTCCAATGAGAAGTCTTGAAATTTGTACGATGTGGAAGGTTTAA 2760 0.4261 MADSSVSFLLDKLSSLLQEEVNLQRGVREDVQHIKYELERHKAILRMADAMEDKDPELKAWVKRVRDVAHDMEDAIDEFNLRLVEQHGQGNNSSVHRFTFGLKTMKARHRIASDMQSIKTKVNVISQGRPDLSGIGSGSSQRLRLDSQGDALLLEEADLGCDSNIWNGGLGKTTLAKQIYDDPNVKKRFRIHAWINVSQSFKLQELLKDLVQQLHNVIGKPAPEAVGQMKSDELKDMIKNLLQRSRYLIVLDDVWLVRVWDSVKLALPNNNRGSRVMLTTRKKDIALYSCAELGKDFNLEFLPEEEAWYLFCKKTFQGNSCPPHLEEVCRKILKMCGGLPLAVVAIGGALATRGRANIEEWQMVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTREEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVNLKAKDQNFATIARDQDIIWPDKVRRLSIINTLQNVQQNRASFQLRSLLMFALSDSLDHFSIRSLCSTGYKLIRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGTIKKLQQLETLDLKHSSVTVLPVEIVELQRLRHLLVYRYEIESYAYFHSRHGFKVAAPIGMMQSLQKLCFIEADQALMVELGKLTQLRRLGIRKMRQQEGAALCSSIEKMINLRSLSITAIEDNEIIDIHNIFSPPRYLQQLYLSGRLDNFPHWISALKNLVRVFLKWSRLREDPLLHLQDLPNLRHLEFLQVYVGEALTFKAKGFPSLKVLGLDDLDELKSMTVEEGAMPGLKKLIIQRCGSLKQVPLGIEHLTKLKSIEFFDMPEELIATLHPSGGEEYKRVQHVPAVYSSYWRDGGWDVYSLETLADRETDLSGGTPMRSLEICTMWKV 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01177 919 CDD RX-CC_like 2 126 IPR038005 -
Spst2g01177 919 Gene3D - 301 388 IPR042197 -
Spst2g01177 919 Gene3D Ribonuclease Inhibitor 662 861 IPR032675 -
Spst2g01177 919 Gene3D Ribonuclease Inhibitor 535 659 IPR032675 -
Spst2g01177 919 Gene3D - 389 479 IPR036388 -
Spst2g01177 919 FunFam Probable disease resistance protein At1g61300 160 293 - -
Spst2g01177 919 Gene3D - 5 112 - -
Spst2g01177 919 PANTHER DISEASE RESISTANCE PROTEIN RP 45 829 IPR044974 GO:0006952
Spst2g01177 919 Gene3D - 167 291 IPR027417 -
Spst2g01177 919 PRINTS Disease resistance protein signature 161 176 - -
Spst2g01177 919 PRINTS Disease resistance protein signature 590 606 - -
Spst2g01177 919 PRINTS Disease resistance protein signature 336 350 - -
Spst2g01177 919 PRINTS Disease resistance protein signature 241 255 - -
Spst2g01177 919 Pfam NB-ARC domain 168 390 IPR002182 GO:0043531
Spst2g01177 919 FunFam Probable disease resistance protein At1g63360 389 477 - -
Spst2g01177 919 SUPERFAMILY L domain-like 467 855 - -
Spst2g01177 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 403 IPR027417 -
Spst2g01177 919 Pfam Rx N-terminal domain 6 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01177 Spst-Chr2 10386840 10389661 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01177 158 618 WRKY Transcription Factor Family AT5G45050 21.162 4.22e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01177 K13457 - gmx:100305458 1582