Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01169 ATGCTCACACTAGCTGGGTCTGGATCCTCCTCCGCAACATTTTCCTTCTGTCAACGCATGAGTCATTGGATTGGAAATAAATGCACATATAGGTTTAGAAAAAAAGAGAAGAAGGAAACATTAAAGATACTGGCCGCAAATTTAAACTGCGTCATGCCTCTAGCTCACCATCACTGGTTCTCACCAAAGTCCGGAATTTACCGTAGCAAGCACGCCCCCGTCGACCTTCCCACCGACCCTTTTCTCGATGCTGTTTCCTTCATTTTTTCCCGCCGCCATACTGGGGTTTCGGCCCTCGTTGATTCCTCGTCTGGGTGTTCCATCTCCTACTCAAAGTTGCTACCTTTGGTAAAATCTGTTGCTTCTGGCCTTCACAAAATGGGTGTTTCGCAAGGTGAAGTGGTTCTCATTCTTCTTCCAAATTCCATTTACTATCCCGTTGTGTTCTTGGGTGTTCTCTATCTGGGTGCTGTTGCTACACCGTTGAACCCTCTTAGTAGTGCCTATGAAATACACAGGCAGGTTGCTGAGTGTGGTGTGAGTGTGGCTTTTACGGTGCCTGAAAATTTTAAGAAACTAGAGCCATTGGGAATTTCTGTTATTGCTGTGCCAGAAAATGAGAAGGGTTTGAGGCATGGTTGCTTTTCATGCTTTTGTGACTTGATTTCCTGTGACTTTGATTTGCCTCAGAGGCCTGTTATCAAGCAGGATGACGCTGCTGGGATATTGTATTCTTCTGGGACAACTGGGGTGAGCAAAGGGGTTGTTCTGTCTCATAAAAATCTTATTGCTATGGTTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGAAAGGTCTTGTTTAGGGAACGTGTATCTGGCTGTTTTGCCAATGTTCCATGTGTATGGCTTGTCGCTATTTGCTTTGGGATTGCTGTCTTTGGGTTCTACGGTCGTTGTGATGAGGAAATTTGACATAGATGAGGTTGTCAGGGTGATTGATGAATATAAAGTTACACACTTTCCTGTTGTTCCACCGATGTTGACAGCATTGATAATGAGGGCAAATGGTGTTAATAGCAGTAAGTTGCAGAGTTTGATACAGGTCTCCAGTGGTGCAGCGCCTTTGAGCTTAGGAGTTGTTAATGACTTTCTCCGAACTTACCCCAACGTTGATTTTATACAGGGTTATGGAATGACTGAGTCAACTGCCGTAGGATCACGTGGTTTCAATACTGGAAAGTTTCGCAATTATTCTTCAATAGGGTTATTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATACTGGTGCATTTTTGCCCCCTGGCAGCAGTGGTGATCTTTGGTTGAGAGGGCCTTCAATTATGAAGGGGTACTTGAACAATGAGGAAGCTACAATGTCAACAATTGATAAAGAGGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATCATGATGGGTACATGTACATATCTCACCGACTCAAAGATATCATCAAATACAAGGGCTTTCAGATTGCTCCAGCCGATTTAGAAGCTGTGTTAGTTTTGCATCCTGAAATAGTTGATGTTGCTGTTGCAGGTGCAATGGATGAAGAAACTGGGGAGATGCCAGTGGCATTTGTGGTAAGGAAGGTTGGAAGTGTGCTGTCTCCGAAGAATGTTATGGATTATGTTGCTGAGCAGGTTGCTCCATATAAGAAGATTAGGAAAGTGTTCTTCACTGACAAGATACCAAGGTCTGCGACTGGGAAGATCCTACGCAAGCAGCTGGAGAATTACTTGATTTCTAAACTATAA 1788 0.4362 MLTLAGSGSSSATFSFCQRMSHWIGNKCTYRFRKKEKKETLKILAANLNCVMPLAHHHWFSPKSGIYRSKHAPVDLPTDPFLDAVSFIFSRRHTGVSALVDSSSGCSISYSKLLPLVKSVASGLHKMGVSQGEVVLILLPNSIYYPVVFLGVLYLGAVATPLNPLSSAYEIHRQVAECGVSVAFTVPENFKKLEPLGISVIAVPENEKGLRHGCFSCFCDLISCDFDLPQRPVIKQDDAAGILYSSGTTGVSKGVVLSHKNLIAMVELFVRFEASQYERSCLGNVYLAVLPMFHVYGLSLFALGLLSLGSTVVVMRKFDIDEVVRVIDEYKVTHFPVVPPMLTALIMRANGVNSSKLQSLIQVSSGAAPLSLGVVNDFLRTYPNVDFIQGYGMTESTAVGSRGFNTGKFRNYSSIGLLAPNMEAKVVDWNTGAFLPPGSSGDLWLRGPSIMKGYLNNEEATMSTIDKEGWLHTGDVVYFDHDGYMYISHRLKDIIKYKGFQIAPADLEAVLVLHPEIVDVAVAGAMDEETGEMPVAFVVRKVGSVLSPKNVMDYVAEQVAPYKKIRKVFFTDKIPRSATGKILRKQLENYLISKL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01169 595 Gene3D - 493 592 IPR045851 -
Spst2g01169 595 SUPERFAMILY Acetyl-CoA synthetase-like 93 591 - -
Spst2g01169 595 CDD 4CL 76 587 - -
Spst2g01169 595 Gene3D - 65 492 IPR042099 -
Spst2g01169 595 FunFam 4-coumarate--CoA ligase 2 493 594 - -
Spst2g01169 595 ProSitePatterns Putative AMP-binding domain signature. 242 253 IPR020845 -
Spst2g01169 595 Pfam AMP-binding enzyme C-terminal domain 507 581 IPR025110 -
Spst2g01169 595 Pfam AMP-binding enzyme 92 497 IPR000873 -
Spst2g01169 595 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 61 588 - -
Spst2g01169 595 FunFam Long-chain-fatty-acid--CoA ligase FadD 68 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01169 Spst-Chr2 10298807 10303318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01169 59 595 Monolignol Biosynthesis Gene Families AT4G19010 58.889 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01169 K01904 - gmx:100804808 973.385