Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01165 ATGGAAGGTGGAGGAAGAGAAGGCTATAATGGAGTGGTGATGACTATGACACGAGACCCGAAACCAAGACTAAGGTGGACAGCAGATCTTCATGATCGCTTTGTAGATGCAGTCACAAAGCTTGGTGGCCCCGATAAAGCGACTCCCAAGTCTGTTCTGAGGCTAATGGGGTTGAAAGGTCTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTAGAAAACAAAATGAGGAACTAAACAAAGAGAATAGTAGATGTTCGTTTGTAAATTTTAGCAATCGTTCTTCGGGGCCTAACACCAGTTACAGAGATGATAATGAAGGGGGAGAAATCCCAATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAGGAGCAGCTAGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTCTCCTCGGATGGATCAGTAAGTCTTGAAGCATCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATTGCAAAGAAAACATAATAGAAGTGAATGAATTTTATAGTAAGAACCATGGCTCAGCTTGCCATTATGAGGAAGTAAGGAGAGAACAACATAGGGATCAAAAGCCCAAGATTGAAGGGGATTCAATACAGCTTGACTTAAACATCAAGGGTAGCAATGACCATGTATCTGCAGGTGGGGCTGAAATGGAAGCCAATATGATTTCATATAGGGTGTAA 810 0.416 MEGGGREGYNGVVMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSNRSSGPNTSYRDDNEGGEIPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSSDGSVSLEASRAQLTEFNSALSNFMENMNKDCKENIIEVNEFYSKNHGSACHYEEVRREQHRDQKPKIEGDSIQLDLNIKGSNDHVSAGGAEMEANMISYRV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01165 269 Coils Coil 121 151 - -
Spst2g01165 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Spst2g01165 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Spst2g01165 269 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Spst2g01165 269 SUPERFAMILY Homeodomain-like 21 78 IPR009057 -
Spst2g01165 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 218 IPR044848 GO:0003700
Spst2g01165 269 Pfam MYB-CC type transfactor, LHEQLE motif 119 165 IPR025756 -
Spst2g01165 269 Gene3D - 20 78 - -
Spst2g01165 269 FunFam Myb family transcription factor 20 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01165 Spst-Chr2 10266201 10268516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01165 12 190 G2-like Transcription Factor Family AT3G24120 53.476 1.64e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g01165 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01165 - - gmx:100810146 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01165 2 10266201 10268516 Spst2g01165 2 10266201 10268516 ECH