Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01155 ATGGATTCTTCAAGCTCTCTCTTGAGGATGGAACACATACCTGGCAAAGGAAGAGGTCTTGTTGCAGCACAGTCCCTCAAAGCTGGTCAAATTGTTCTCACTGAATCCCCTCTCATTCTCTACTCAGCTTCTCCTCTCTTTGCACCTTCTTCTTCACCTTTCACCTACTGTGATCACTGCTTCGGAATCGTATCCTCTTACCCTAACATCTTTCCATGCCCCTCTTGCTCCAACCACAGTTTCTGCTCCCAAAAGTGCCTCTCCCTTGCACTCAACTCCTCACACTCCACTTGGGTATGCAAAGCACTCATCTCTCTTCTTCAACACCCCAACTCAACACTCCTTCAACAACACCCCCCAGAACGCCAAGTTCAAGCCCGTTTCATTGTAGCCTCTCACAACCTCTTCCTCCAAGCCCCTTCTGAGTTTCACACTTTGCTCTCTCTTCATGGCACTCCAGATAGTGATATTCTTGATGTTGCTAACTTTCTCCACTCTCTAATCTCGCCTCTTTTCCCACCCCAGAGTCAATTTTCTGTTGATCTCACTGCACAACTTCTTGCAAAGGATAGACTCAACTCCTTTTGCTTGATGGACCCCTATTCCCCTGATGGGCCTCAGAGATCTATCAAAGCATATGCTATCTACCCTAAAGCCACGTTCTTCAACCATGATTGTCTTCCCAACGCGTGCAGGTTTGATTACGTGGACACTAGTGATGAACACAACACTGAAATTGTTATTAGGTTGATTGAGGATGTTCCCGATGGAAAAGAGATTTGCATCAGCTATTTCAGGATGGGAAGGGATTATTGTACCAGGAAAAAGATCTTGATGGAGGATTATGGTTTCACATGTGAATGTGATAGATGCATGATTGAAGCTAACTGGAAAGAAAATGAAGGTGAGAAGAACAATGACCTGCCACATATGCTGTTCCTTTGCAAGCATGTTTGTGAGAGGAAGAATTGTGCTGGCACTATGGCTCCTCTGCCTCCAAAAGATGATGTGCCATCTAATGTTCTGGAATGTAACTTCTGTGGTAATTTGAAAAAAAATGATTGGGATGTTGCTTAG 1077 0.4466 MDSSSSLLRMEHIPGKGRGLVAAQSLKAGQIVLTESPLILYSASPLFAPSSSPFTYCDHCFGIVSSYPNIFPCPSCSNHSFCSQKCLSLALNSSHSTWVCKALISLLQHPNSTLLQQHPPERQVQARFIVASHNLFLQAPSEFHTLLSLHGTPDSDILDVANFLHSLISPLFPPQSQFSVDLTAQLLAKDRLNSFCLMDPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDYVDTSDEHNTEIVIRLIEDVPDGKEICISYFRMGRDYCTRKKILMEDYGFTCECDRCMIEANWKENEGEKNNDLPHMLFLCKHVCERKNCAGTMAPLPPKDDVPSNVLECNFCGNLKKNDWDVA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01155 358 Gene3D - 56 116 - -
Spst2g01155 358 Pfam SET domain 17 264 IPR001214 GO:0005515
Spst2g01155 358 SMART set_7 6 271 IPR001214 GO:0005515
Spst2g01155 358 ProSiteProfiles SET domain profile. 1 265 IPR001214 GO:0005515
Spst2g01155 358 SUPERFAMILY SET domain 6 287 IPR046341 -
Spst2g01155 358 Gene3D - 117 194 - -
Spst2g01155 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 299 354 IPR044238 -
Spst2g01155 358 Gene3D SET domain 19 291 IPR046341 -
Spst2g01155 358 CDD SET_SMYD 192 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01155 Spst-Chr2 10195883 10196959 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst2g01155 SET 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01155 - - gmx:100808530 581.637