Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01152 ATGTTTACATGCATAGCGTGTACGAAGCAAACGGCGGAGGAGGTGGAAGAAGGTGGTGAGAGTGGCACGTCGAGTACAAAAGAAGTTGTCAAAAGCCTGAGTGCGCAGTGTGGTGCGTTTTGGGCACTTTTGTTGCTGTTGACGGATGGTCCACTTCCTTCCACGTTGAAGGATATGGTACTGAAGTTTTCAAGTTCTTACAAGCAGTGCAAACCTTGCACAGGGTCCAGTACCTACAAGAAAGGACAGAGGCCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCTTATATTGGAGGAGCAAGCTCAACTTCTAACCCTGCTTGGGACTTCACAAGCTCCTATTTCCCTGGTCATAGATCAGACCAAAGATTTCTGGGGGGATTGAGTGGTGATAGGTCCTCTAGAGGACCAGAGTCAATACCAGTCTGTGATGTAGTTGTTGAGGAAGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCTGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTTGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTACAACGTCCAGAGATTCAATCGACAAGCTCTTAACACTCCTTCCAGATCTGAGGATGAGCAAAGAGACTCTTCTTACTCAAGACTGACATGTGGACAAGAAAGCCCCGGGTCGATGTCGTTAAAGGAATGGACACCAAGGAATCACTATAAACCCTCAGGGAATAACCCCTCTGAAGCTATGGATCAAGGTGGTGGTCAAAACTTCCATGCCGGGTCATCTGTGGATGCATCAAGGACAACCACCTCTTCTAGAGATGAGCCTTCAATGAGCAATGCTAGTGACCTGGAGGCAGAATGGATAGAGCAAGATGAACCAGGAGTGTACATTACGATCAGGCAATTAGCTGATGGAACTAAGGAGCTTCGTCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGGCATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATATCTTTGA 1095 0.4685 MFTCIACTKQTAEEVEEGGESGTSSTKEVVKSLSAQCGAFWALLLLLTDGPLPSTLKDMVLKFSSSYKQCKPCTGSSTYKKGQRPYPDFDTISEGVPYPYIGGASSTSNPAWDFTSSYFPGHRSDQRFLGGLSGDRSSRGPESIPVCDVVVEEEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRLTCGQESPGSMSLKEWTPRNHYKPSGNNPSEAMDQGGGQNFHAGSSVDASRTTTSSRDEPSMSNASDLEAEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01152 364 ProSiteProfiles BRX domain profile. 309 364 IPR013591 -
Spst2g01152 364 Pfam Transcription factor regulating root and shoot growth via Pin3 158 212 IPR013591 -
Spst2g01152 364 Pfam Transcription factor regulating root and shoot growth via Pin3 308 363 IPR013591 -
Spst2g01152 364 MobiDBLite consensus disorder prediction 260 302 - -
Spst2g01152 364 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 364 IPR044532 -
Spst2g01152 364 MobiDBLite consensus disorder prediction 237 253 - -
Spst2g01152 364 MobiDBLite consensus disorder prediction 222 310 - -
Spst2g01152 364 ProSiteProfiles BRX domain profile. 158 213 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01152 Spst-Chr2 10175723 10180436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01152 1 364 Major Intrinsic Protein MIP AT1G31880 61.170 2.04e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01152 - - gmx:100809614 603.208