Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01137 ATGGAGTCCACTGAGAATGGGAGCGTGTCAGTTAGAGAGTTCCATGCGAATGGAAGCCGCATGGTTGCATCAGAAGTTGAGGCCAAACTTGATCAAGGAAATATTCAAGAGGCAGAAGATTCTTTGCGAGAAGGATTGTCGCTAAATTTTGAGGAAGCAAGAGCTCTTCTTGGTAAGTTGGAGTATCAAAGAGGAAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAGCGGTTGCAATCTTCCTTTTCTGAAAAAACAACAGTCAAGAAAGGTCGTACTAGCACTGAATCAGCCTCCTCAGCCTCTCAGCATGCAGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCTGCAAAAACTGGGGAGATTTACTGAAGCTGCTAATGATTGTAAACGAATTCTTGATGCTGTTGAGAAGATATTTTATCAGGGCATTCCTGATGTTCAAGTGGATAATAGATTGCAAGAGATAGTCAGCCATGCAGTAGAGATCCTTCCAGAGCTTTGGAAACAAGCTGCTTGCTATGATGAGGCAATTGCAGCCTATAGGCGAGCCCTTCTTAGTCAATGGAACCTTGATAATGATTACTGTGCAAGAATTCAGAAGTCATTTGTTATTTTTTTGCTATACAGTGGGGTGGAGGCAAGTTCACCTAGCTTAGGAGTTCAGGTTGATGGATCATACGTGCCTAAAAATAATCTTGAAGAGGCCATTCTGCTATTGATGGTTCTTTTGAGAAAGTTTAGCCTTGGTAAGATGAAATGGGATCCTTCAGTCATGGAGCACCTTTCTTTTGCACTTTCTACGTGTAGCCAAACTTCTATTTTAGCAAAGCAACTTGAAGCATTGATGCCTGGAGTATACCATCGAATTGATTGTTGGAATTACTTAGCTTTATGTTATTGTGGAGCTGGAGAAAATGACACGGCTTTGAGTCTGCTAAGAAAGTCTTTGCACAAACATGAACGACCAAATGACCTTACATCATTGTTGTTAGCAGCCCGGATCTGCAGTGAGGATCCTCATCTTGCTGCTGAGGGAGTGAACTATGCACAGACGGCAGTCAATAATGCTAATGGTCAAAATGAACATTTGAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTTTGGGAAAGCAAGCTAAGATTGCTTCCTCTGACTTTGAGAGGTCTCGCCTTCACTCCAAAGCTTTGGAGTCATTGGTGGCGGCAATAAAATTGGAGCCTAACAATTCTGATCTGCTTTTTGAATTGGCTGTTCATTATGCACAGCACCGAAATTTGACTGCTGCTTTGCGCTCTGCGAGGCATTTCTTTCATCAGACAGGTGGTTCTGTGTTGAAGGCTTGGAGATTGCTTGCTCTAATTTTGTCTGCACAAAAAAAATTTTCAGAAGCTGAGATGGTAACAGATGCTGCTTTAGATCAGACTGCAAGATGGGAGCAGGGGCCTCTGCTTAGGCTGAAAGCAAAGCTTAAGATCTCCCAAAAACGACCCATGGATGCTATTGAAACTTACCGATACCTTCTTGCATTGGTTCAAACCCAGAAGAAATCATTTGGATCTCAACAAATTGATTCAAAGGCTGTGGATGATAAAATAAATGAATTTGAAATTTGGCATGGTCTAGCAAATTTATATGCTAGTCTTTCTCGTTGGAAGGATGCTGAAATATGTCTCCAGAAGGCCATGGAGTTGAAGGAATACTCTGCAGCATTAATGCACGCTCAAGGTGTTTTGCTTGAAGGACGTGGGCAAAATGATGAAGCTCTTGTTGCTGCCATTAATGGTGTACTAATTGAACCAACCCATGTTCCATGCAAGATCTTCATGGGTTCTATGATTCATAAAATGGGTCCAAAGTATTTGGATTCTGCAAGAAGTTCATTGTCTGATGCACTCCGAATAGAACCCACAAACCGGATGGCTTGGTATTACTTAGGATTACTTCACAAGAACGATGGCCGAATAGGTGATGCTGCTGACTGCTTCCAAGCAGCTTCCATGCTTGAAGAATCTGATCCCATCGAAACTTTCAGTTCTGTACTTTGA 2085 0.4235 MESTENGSVSVREFHANGSRMVASEVEAKLDQGNIQEAEDSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQSSFSEKTTVKKGRTSTESASSASQHAASLVLEAIYLKAKSLQKLGRFTEAANDCKRILDAVEKIFYQGIPDVQVDNRLQEIVSHAVEILPELWKQAACYDEAIAAYRRALLSQWNLDNDYCARIQKSFVIFLLYSGVEASSPSLGVQVDGSYVPKNNLEEAILLLMVLLRKFSLGKMKWDPSVMEHLSFALSTCSQTSILAKQLEALMPGVYHRIDCWNYLALCYCGAGENDTALSLLRKSLHKHERPNDLTSLLLAARICSEDPHLAAEGVNYAQTAVNNANGQNEHLKGVALRMLGLCLGKQAKIASSDFERSRLHSKALESLVAAIKLEPNNSDLLFELAVHYAQHRNLTAALRSARHFFHQTGGSVLKAWRLLALILSAQKKFSEAEMVTDAALDQTARWEQGPLLRLKAKLKISQKRPMDAIETYRYLLALVQTQKKSFGSQQIDSKAVDDKINEFEIWHGLANLYASLSRWKDAEICLQKAMELKEYSAALMHAQGVLLEGRGQNDEALVAAINGVLIEPTHVPCKIFMGSMIHKMGPKYLDSARSSLSDALRIEPTNRMAWYYLGLLHKNDGRIGDAADCFQAASMLEESDPIETFSSVL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01137 694 Pfam Tetratricopeptide repeat 551 580 IPR019734 GO:0005515
Spst2g01137 694 Pfam Tetratricopeptide repeat 304 337 IPR019734 GO:0005515
Spst2g01137 694 PANTHER PROTEIN NPG1 5 691 IPR043376 -
Spst2g01137 694 Gene3D Tetratricopeptide repeat domain 533 687 IPR011990 GO:0005515
Spst2g01137 694 Gene3D Tetratricopeptide repeat domain 237 532 IPR011990 GO:0005515
Spst2g01137 694 Gene3D Tetratricopeptide repeat domain 20 206 IPR011990 GO:0005515
Spst2g01137 694 SUPERFAMILY TPR-like 30 202 IPR011990 GO:0005515
Spst2g01137 694 SUPERFAMILY TPR-like 118 443 IPR011990 GO:0005515
Spst2g01137 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 494 527 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Spst2g01137 694 SMART tpr_5 458 491 IPR019734 GO:0005515
Spst2g01137 694 SUPERFAMILY TPR-like 403 678 IPR011990 GO:0005515
Spst2g01137 694 Pfam Tetratricopeptide repeat 28 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01137 Spst-Chr2 10058890 10069013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01137 11 694 Calmodulin-binding Proteins AT2G43040 69.041 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01137 K21843 - gmx:100814609 1157.13