Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01127 ATGATCCCTATAGCCACACCAGCAGGGAGAGAGAAAGAGAGGGACCTCGGAGAGGTGGAGGAGGCCTGGGAGGGAGGAGGGCTGGTGACCAGAAGGTGGCATGTGGCTCTCATGCGCCAAGGAGCAGCAAACAAGGATGCTGCGCATAGAGGTGGTGGGGATGATTCAGGTTGGCTGTCATGCTGTGTGACAGTCCAAACCTGGTACCTGTCCGAAGGAATGACACACGGCAAACAATGGCGAATAACAGCAGTTTCATTGTATTTTGAGATGAAGCATACCAGACCTTTGTTGGAGAAAAAGGAATATAACAGCTGTAAAGATATTGCGAATTTTCACCGGCCAAAAGCATTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGGAAATTGCCAACACAAGGACCTATGAAGATTATTATAAAGAGTTTGGGTGGCAAGGGGAGTAAACTGCATGTCGATAGTGAAGAAACTCTCTCTTCTGTGAAAGCAAAAGCTTCCAAAAAGCTAGATTTTAAAGTATCAGAAACAGTGAAAATATTTTATTTAGGGAGGGAGCTTCAAGATCACAAGTCACTTGCTGAACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGCCAAAAGCACAAAGGGTTCCCGGTGAGAACAAGTCTTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATATGTCGAGGTACAGTGCCGTTTTGGTGAATAGGTATTGCGAAGAAAGGCCTTTACTTTTGAGCAACGTTGGAATGGGTGCAAGACTTTGTACATACTATCAAAAATGCTCACCGGATGACCAATCTGGTGCCTTATTACGCAACACAGATGGTAGCTTGGGGCACATTATTGCTCTGGATCCTGCAGATAAATCTCCTTTCCTTGGAGATTTGAAACCTGGTTGCAGTCAGTCATCACTTGAGACAAATATGTATAGAGCGCCAGTATTTCCTCATAAAGTTCCACTAACTGACTATCTGCTAGTTCGCTCATCAAAGGGAAAGTTATCATTAAGGCGCATTGATAAAATTAATGTTGTCGGACAGCAGGAGCCACTCATGGAGGTATTTTCTCCTGGAAGTAAAAATCTTCAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGAGAATTTCAAGCAGCAGAGAAGCGGCACTTGCCTCCTTATATCCGGGTTGATGAATTCTTGTCACAGTTTCCTTACCAATCAGAAGCGTCATTCCGTAAGAAAATAAAGGAATATGCCAATTTACAGAGGGGAGCCAATGGACAGTCAATTTTGGTTAAAAAGAGAAATTTTCGCATGTGGTCAGAAGATGAATTGAGAAAAATGGTTACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTCTATCGACTAAAACATTTAGGAATAACTGAAACACACCCTACAAATATTTCATCTGCAATGAGCCGGCTTCCTGATGAAGCAATAGCATTGGCTGCCGCATCACACATTGAGAGGGAACTGCAGATTACTCCTTGGAACTTGAGTAGCAATTTCGTTGCTTGTACAAGCCAGGGAAAGGAAAATATTGAACGGATGGAAATTACTGGTGTTGGTGATCCATCTGGTCGTGGCATGGGTTTCAGTTATGCTAGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCAGCTGCTAACCGCGGAGGTTCTACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGCATTGCTATGATACGTAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCAACAACTATCAGCAAGTATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAAAAATGCCAGGAGATTTGGGATCGACAAGTTCAGAGTCTGTCAGCAGTAAATGGTGATGAGAATGAGAGCGATTCAGAAGGGAATAGTGATCTGGATTCTTTTGCTGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAGGAGGGAGAAGAGGGTACAAATGACTTAAAACGTGACAAGGGAGATGGTGTGAAGGGTCTTAAAATGAGAAGACGCCCAACTTTGGCTCAGGCAGAGGAGGAAATAGAAGACGAAGCAGCTGAGGCTGCTGAATTATGCAGGTTGCTTATGGATGATGATGAATCTGATAGGAAGAAAAAGAAGAAAACTAAAGGTATGGTGGAAGAAACAAGATTGGTAGCAAAGGTGCCTTCGAAATTTGCCTTTGACAATGGTGAACAAGTTAAGCAAATAACAAATACTTTACAATTAGATGGAAATAATCCCTTGAAAGAGGATGCAATCACAGATCAAAGAGAGGAGGAAAACTTTATTGCTAAAAAAAGCAAATCAGTGAAGGTCAATAAAGCCAAGAAGAATGATATGACACCTATTAGCCTTCCCAATAAAAAAATAAAATTGAATATGGGAGAAGGAATTAAGAACCAGGTGTTTAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGTCAGCCTGGGCACATGCGAACGAACAAGAACTGTCCAAAATATGGTGAGGATCTTGAAACTCAGCTTGAATCTGCAGATATGGAAAAATCATCTGGAAAACCCATATTTGTGGATCATTCCAGTCACTCCCAGGCTAAAGCCCCCTCCAAAAAGTCAATGCCAAAAAGCACCACCAAAATTGCTCCTGTTGACAATTCAGCCAAAGTTCCACTGAAATTCAAATGCGGCTCCACAGAGAAATCTTCTGATAAACCTGCAACAGAGATCTTGCAGAATTCTGACAAGCCAGTCACTTCGGACTCAGAAACTGCAAAATCTGCTAAGGTTAATAAGATAATTATTCCCAAAAAAGGGAAACCGGATGATACACAAGCTGAATCCCGTAAGCATGCTGTTGTTATACGGCCTCCTACTGAATCAGGTAGAGGGCCTCCTACTGATTCAGGTAGAGGGCAGGTTGATTATAACAAGTTACCAATTAAAATACGCCCACCAACAGAAATAGATAGGGAGCAAAGTCACAAAAAGATTGTTATAAAACGTACAAAGGAGGTTATTGATCTAGAACTGGACAGTCCTGGTGGAAACACAGGACTTCAACACAGAAAGACTAAAAGAATTGTTGAATTGTCGAATTTCGAGAAACAAAAGAAACAAGAGAGCGTGTATGGAACTGAAGGTTTTCCAAAATGGGGCACTAAAGAGGACAGAAGATGGTGGGAAGAGCAAGAGAAACGAAGAAATGATGCAAGGCTTCGAGAAGAAGACAGAGCAAGAAGGCATCATAAAGAAGAAATCAGGATGCTCAAAGAGCAAGAAAGGTTAGACGAAATAAAAAGATTTGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAAGAACGGCAAAAGGCTAAGAAGAAAAAGAAGAAGAAAAAACCTGATTTAAGAGATGAGTATCTAGATGACCCTAGAGCAAGACGACATGATAAGAGAATGCCTGAAAGAGAGCGGAGTGGTAAAAGGAGATCTGTTGCTGAGTTAGGAAAGATTGGTGCAGATTATATGCCACCAACAAAACGCCGAAGAGGGGGAGGGGGAGAGGTACGTTTCTATGTTGGTTTGGCAAATATATTGGAGAGCATTGTGGACAGCATTGTGAAAGATAGGTACGAGCTGTCGTATCTTTTCGTGAAACCGGTGTCGAAGAAGGAGGCTCCTGACTACCTGGACATTATAGACACGCCTATGGATCTTTCCAGAATCAGGGAGAGGGTACGGAACATGGAGTACAAGAGCCGAGAAGATTTCAGGCACGATGTCTGGCAAATTACTTATAATGCACATAAATATAACGACGGGCGAAATCCGGGAATTCCTCCCCTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAACGATGATAGCCTCACTTCAGCAGAAGCTGGCATTGAAATTAGAGATTTCTAG 4119 0.4268 MIPIATPAGREKERDLGEVEEAWEGGGLVTRRWHVALMRQGAANKDAAHRGGGDDSGWLSCCVTVQTWYLSEGMTHGKQWRITAVSLYFEMKHTRPLLEKKEYNSCKDIANFHRPKALWYPHDNEVAVKEQGKLPTQGPMKIIIKSLGGKGSKLHVDSEETLSSVKAKASKKLDFKVSETVKIFYLGRELQDHKSLAEQNVQPNSLLHLVRTKIHLWPKAQRVPGENKSLRPPGAFKKKSDMSRYSAVLVNRYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGALLRNTDGSLGHIIALDPADKSPFLGDLKPGCSQSSLETNMYRAPVFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVFSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRVDEFLSQFPYQSEASFRKKIKEYANLQRGANGQSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDESDRKKKKKTKGMVEETRLVAKVPSKFAFDNGEQVKQITNTLQLDGNNPLKEDAITDQREEENFIAKKSKSVKVNKAKKNDMTPISLPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGQPGHMRTNKNCPKYGEDLETQLESADMEKSSGKPIFVDHSSHSQAKAPSKKSMPKSTTKIAPVDNSAKVPLKFKCGSTEKSSDKPATEILQNSDKPVTSDSETAKSAKVNKIIIPKKGKPDDTQAESRKHAVVIRPPTESGRGPPTDSGRGQVDYNKLPIKIRPPTEIDREQSHKKIVIKRTKEVIDLELDSPGGNTGLQHRKTKRIVELSNFEKQKKQESVYGTEGFPKWGTKEDRRWWEEQEKRRNDARLREEDRARRHHKEEIRMLKEQERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPDLRDEYLDDPRARRHDKRMPERERSGKRRSVAELGKIGADYMPPTKRRRGGGGEVRFYVGLANILESIVDSIVKDRYELSYLFVKPVSKKEAPDYLDIIDTPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTSAEAGIEIRDF 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01127 1372 Pfam Protein of unknown function (DUF3591) 105 625 IPR022591 -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 923 950 - -
Spst2g01127 1372 Gene3D - 1247 1370 IPR036427 GO:0005515
Spst2g01127 1372 MobiDBLite consensus disorder prediction 1001 1022 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 717 745 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 1129 1158 - -
Spst2g01127 1372 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 105 1370 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Spst2g01127 1372 CDD Bromodomain 1257 1353 - -
Spst2g01127 1372 FunFam Transcription initiation factor TFIID subunit 1 122 212 - -
Spst2g01127 1372 Pfam Bromodomain 1259 1334 IPR001487 GO:0005515
Spst2g01127 1372 MobiDBLite consensus disorder prediction 712 748 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 1174 1225 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 1193 1225 - -
Spst2g01127 1372 Pfam Ubiquitin family 142 212 IPR000626 GO:0005515
Spst2g01127 1372 ProSitePatterns Bromodomain signature. 1273 1330 IPR018359 -
Spst2g01127 1372 Coils Coil 741 761 - -
Spst2g01127 1372 CDD Ubl_TAFs_like 140 211 - -
Spst2g01127 1372 Gene3D - 122 212 - -
Spst2g01127 1372 SMART ubq_7 140 212 IPR000626 GO:0005515
Spst2g01127 1372 PRINTS Bromodomain signature 1285 1301 IPR001487 GO:0005515
Spst2g01127 1372 PRINTS Bromodomain signature 1271 1284 IPR001487 GO:0005515
Spst2g01127 1372 PRINTS Bromodomain signature 1301 1319 IPR001487 GO:0005515
Spst2g01127 1372 PRINTS Bromodomain signature 1319 1338 IPR001487 GO:0005515
Spst2g01127 1372 Coils Coil 1139 1192 - -
Spst2g01127 1372 SUPERFAMILY Bromodomain 1238 1359 IPR036427 GO:0005515
Spst2g01127 1372 ProSiteProfiles Ubiquitin domain profile. 140 210 IPR000626 GO:0005515
Spst2g01127 1372 SMART bromo_6 1247 1358 IPR001487 GO:0005515
Spst2g01127 1372 MobiDBLite consensus disorder prediction 909 1062 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 967 993 - -
Spst2g01127 1372 MobiDBLite consensus disorder prediction 680 699 - -
Spst2g01127 1372 SUPERFAMILY Ubiquitin-like 110 210 IPR029071 -
Spst2g01127 1372 ProSiteProfiles Bromodomain profile. 1268 1338 IPR001487 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01127 140 210 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.028 5.19e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01127 K03125 - gmx:100780733 2145.16