Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01126 ATGTCTCTCCTCAGCCGATTCTTCTACAAGCGTCCCCCAGATGGCTTACTCGAATTCACCGACAGAGTCTATGTATTTGATTCCTGCTTCTCCACCGAAGCGCTTCCTGACGGAATGTACCAGCTCTACCTCCGCCAAATCCTCTCCGACCTCCACGAGGACTTCCCGGAATCCTCCTTCCTCGCCCTCAACTTCCGCGACGGTGACTCCCGCAGCCGCTTCTCCCGCCTCCTCTGCGACTTCGACGCCACCGTCATCGACTACCCCAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTCTGCGACACCTGCCTCGCCGACCCCGCCACCGTGATGCTCTTCCACTGCGAGCGCGGCGGCTGGCCTCTCCTCGCTTTTCTCCTCGCTGCTTTCCTCGTTTTCCGGAAGGTGCAGAGTGGGGAGCGCAAGATTCTGGAGATGGTGCACAGGGAGGCGCCGAAGGGGCTGCTGCAGCTGCTGTCGGCGCTGAACCCAATGCCGTCGCAATTGCGGTATGTTCAATATGTGGCGCGGAGGAACATTGGCGCGGAGTGGCCCCCGCCGGAGAGGGCACTGTCTCTGGACTGTGTGATACTCAGAGGGGTTCCGGGTTTTGATGGGGGAAATGGGTGCCGGCCGTTGTTTAGGATTTTTGGGAGGAACTTGCTTAGTAAAGGGGGGGGCCTTTCTACGCAGATGATTTATAATATGCATAAGAAGAAGAAGAGTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGATGTGGTGTTGGAGTGTGTGCATTTGGATTTGGATCCGGAGAGGGAGGTGATGATGTTTCGAGTGATGTTCAACACAGCGTTCATTCGGTCCAACATTTTGATGCTTAATGCTGAAAACTTGGACATTGTGTGGGATTCGAAGGAGCGTTATCCGAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCAACAAGTATTTTAGATGGTGAGGTTAAAGGTGGATTGCCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTCAGTGGTGCAGAATGGATTGAAAGTGGTGATTCTGCTGCTGTTTGGTTGCTCAAGCAGCTTACAGTCTTTAATGACGCCAAAGAGTTTTCAAGGTTTCCAGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGAGGAAGAAAATAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGACGTTATTCCCAGGACTTATGCTGATCCTTCAAAATTATTTACATCTGACACACCTGATTTGGTCCATTTAACTTTTGAAAACAATGGTGGAGATTATGTAAATCTCACTTCAGGAACACCTGATCAATTACTAACCGATAATGTTTCATTACCTCATCATGCTCTAAGTAATGAATATTCTCCTTGTTTGTCTCCACCATCACCTTCAGCTGTTCCCGCTACTCAACCTCTTAACATATCAGCACCACCACCTCCTCCATCAATACCTATACAGCCAGGTTTAGCTCCTCCTCCTCCTCCTCCACATCATATAGTTCATAATGTGAATAATGCTTCTACATTGCCTTCACCTCCTCCTCCTCCTCCTCCTCCAGCCCCTTCTCTCCCTATAGGTAGCAATGCCAATGGCACTCCTGGTTTATCTCCCCCTCCTCCTCCAGGTCCTGTGCGAACAAGTTTTCCGTCAGCACCTCCACCTCCACCTCCACCACCTCCTCCTCTTCCTACACCTTCAGGTCCTATGCAAACAGGTTCATCCCCATCACCTCCACCTCCGCCTCCTTCAGGATTTGTTGAAACAGGTTCAGCTCCACCACCCCCACCCCCACCTGCTCCAGTTCCTTCAAGATCAGTTTCTGTCCCACCACCACCTCCACCTCCTCCATGCCCTTTAAGAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCGGGTCCTTTAAGAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCGGGCCCTTTAAGAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCGGGCCCTTTAAGAACAGGTTCTGTCCCGCCACCACCTCCACCTCCTCCAGGCCCTTTAAGAACAGGTTCTGTCTCGCCACCACCTCCACCTCCTCCGGTTCTTGTACAAACAGGTTCAACTCCACCTCCACCTCCACCACCTCCTCCTCCAGGACCTGTAAGAACAGGTTCAGCTCCACCACCACCTCCACCTCCTCCAGGCCCTGTACAAATAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTGTACGAATAGGTTCAGCCCCACCACCACCTCCACCTCCTACAGGGACTGTACGAATGGGCTCAGCCCCACCACCACCTCCACCTCCTCCAGGGACTGTACGAATGGGCTCAGCCCCACCACCACCACCTCCACCACCTCCAGGTCCTGTACAAATAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTCTACGAATGGGCTCAGCCCCCCCACCACCACCACCTCCTCCAGGTCCTGTACGAATAGGTTCAGCCCCACCACCTCCTCCTCCTCCTCCTCCGGGTCCTGTACAAATTGGTTCTTCCCCACCACCTCCACCTCCTCCTCCGGGTCCCACAAGAACAGGTGCTGCTCCACCACCTCCTCCTCCTCTGAGTGTACGAACAGGTCCAGCTCCACCACCACCACCAGCACCAAAGCCTCCAGGTGCTCCTCCTCCTCCACCTGCTCTTGGTTTATCGACAATGCCACCTCCACCTCCTGCAGCTAGTGCCTCTAATGTGGCACCTCCACCTGGTAAAGCTTCAACAACAAATGTTGGAAGAGGTCGTGGTACTGCTGGTACTGCTAATGCTCCAAAGAAAACTTTGCTAAAACCCTTACACTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGCGGAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAACAGTACTAAAGGTGGAGTTCGGCGTGGTCCTAATATTAACAAACCGGAGAAAGTACAACTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGAAATGCTTAAAGCAGTACTGGCATTGGATTCTTTAGTTCTTGATATTGATCAGGTAGAGAATCTCATCAAGTTCTGTCCAACAAAGGAGGAGATGGAGATGTTGAAGAATTACACCGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCCCGTGTGGAATCCAAATTAAGGGTTTTTGCATTTAAAATCACCTTTTCTTCTCAGGTGAGCGATTTGAAGATAAATTTGAACACAATCAACCATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATACTTACACTGGGAAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGTCTTCTTAAGCTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTCGCTGAAAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCGGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTCGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCATTTGAGCAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAGCTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAATTCACATTCCAAAAAAGATGTGATTCGGTAG 4173 0.4994 MSLLSRFFYKRPPDGLLEFTDRVYVFDSCFSTEALPDGMYQLYLRQILSDLHEDFPESSFLALNFRDGDSRSRFSRLLCDFDATVIDYPKQYEGCPLLPLSLLHHFLRLCDTCLADPATVMLFHCERGGWPLLAFLLAAFLVFRKVQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDIVWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIESGDSAAVWLLKQLTVFNDAKEFSRFPGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRTYADPSKLFTSDTPDLVHLTFENNGGDYVNLTSGTPDQLLTDNVSLPHHALSNEYSPCLSPPSPSAVPATQPLNISAPPPPPSIPIQPGLAPPPPPPHHIVHNVNNASTLPSPPPPPPPPAPSLPIGSNANGTPGLSPPPPPGPVRTSFPSAPPPPPPPPPPLPTPSGPMQTGSSPSPPPPPPSGFVETGSAPPPPPPPAPVPSRSVSVPPPPPPPPCPLRTGSVPPPPPPPPGPLRTGSVPPPPPPPPGPLRTGSVPPPPPPPPGPLRTGSVPPPPPPPPGPLRTGSVSPPPPPPPVLVQTGSTPPPPPPPPPPGPVRTGSAPPPPPPPPGPVQIGSAPPPPPPPPGPVRIGSAPPPPPPPTGTVRMGSAPPPPPPPPGTVRMGSAPPPPPPPPPGPVQIGSAPPPPPPPPGPLRMGSAPPPPPPPPGPVRIGSAPPPPPPPPPGPVQIGSSPPPPPPPPGPTRTGAAPPPPPPLSVRTGPAPPPPPAPKPPGAPPPPPALGLSTMPPPPPAASASNVAPPPGKASTTNVGRGRGTAGTANAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGNSTKGGVRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPEMLKAVLALDSLVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVSDLKINLNTINHAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNSHSKKDVIR 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01126 1390 SMART it6_source 526 1390 IPR015425 -
Spst2g01126 1390 Gene3D Protein tyrosine phosphatase superfamily 14 189 IPR029021 -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 959 974 - -
Spst2g01126 1390 SUPERFAMILY Formin homology 2 domain (FH2 domain) 990 1371 - -
Spst2g01126 1390 SMART PTEN_C2_2 196 1089 IPR014020 -
Spst2g01126 1390 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 338 IPR035892 -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 1030 1050 - -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 499 538 - -
Spst2g01126 1390 PANTHER FORMIN-J 893 1385 - -
Spst2g01126 1390 Coils Coil 1352 1375 - -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 408 433 - -
Spst2g01126 1390 ProSiteProfiles Formin homology-2 (FH2) domain profile. 977 1377 IPR015425 -
Spst2g01126 1390 FunFam Formin-like protein 976 1363 - -
Spst2g01126 1390 ProSiteProfiles C2 tensin-type domain profile. 198 338 IPR014020 -
Spst2g01126 1390 Pfam Formin Homology 2 Domain 982 1352 IPR015425 -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 1030 1044 - -
Spst2g01126 1390 Gene3D - 195 341 - -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 493 983 - -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 547 563 - -
Spst2g01126 1390 Gene3D Formin, FH2 domain 976 1363 IPR042201 -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 572 956 - -
Spst2g01126 1390 PRINTS Proline rich extensin signature 588 613 - -
Spst2g01126 1390 PRINTS Proline rich extensin signature 519 535 - -
Spst2g01126 1390 PRINTS Proline rich extensin signature 495 516 - -
Spst2g01126 1390 PRINTS Proline rich extensin signature 541 558 - -
Spst2g01126 1390 MobiDBLite consensus disorder prediction 1354 1390 - -
Spst2g01126 1390 Coils Coil 1258 1285 - -
Spst2g01126 1390 Pfam C2 domain of PTEN tumour-suppressor protein 197 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01126 Spst-Chr2 9931472 9942201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01126 947 1361 FH2 protein (formin) Gene Family AT1G31810 78.043 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01126 - - gmx:100809152 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01126 2 9931472 9942201 Spst2g01126 2 9931472 9942201 ECH