Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01113 ATGGCTTTTATTCATCGAAATCCAGGTGAGGTGCTTCTCAGCTTTAGGACAGCAGTTGTTAATTCTGATGGAATCCTATTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCGAAAACCAAAAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGTGGGTCTATATCACCTGACCTTGGGAAGCTTGAGAATATGAGGGTTCTTGCGCTTCATAACAACAACTTCTATGGGACAATTCCGTCAGAATTGGGAAATTGCACTGCATTGGAGGGAATATTTTTACAGGCAATGTATCAACCAATTTTCTGGTCGGACCTATACCTTCTGATGGTGTCCTTGGCAACTTTACTGGAAGCTCGTAACTTTGTTGGAAATCGTGGTTTGTGTGGAGTTAAAATCAATTCAACATGTAAAGATGATGGTTCACCGGGTGCCAATGCTCCATATACTTCCTCAGATCAAAATCAAATGGGAAAGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTCGGAGCTCTACTTTTGGTCGCACTTATGTGCTTCTGGGGTTGTTTTCTTTACAAGAAGTTTGGTAAAAACGACAGCATAAGCCTGGCAATGGATGTTGGTGCAGGTGCATCGATTGTGATGTTTCATGGAGACCTACCATATTCTTCTAAAGACATCATTAAGAAACTAGAGACTTTGAATGAAGAACACATAATAGGGATTGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTCTTTGCTTTGAAAAGGATTGTAAAGTTGAATGAAGGGTTTGATCGATTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACATCGTTATCTAGTGAACTTACGAGGATATTGCAATTCACCAACGTCAAAGTTGTTAATATATGATTACCTACCAGGTGGTAGTCTGGATGAAGCCCTTCATGAAAGAGCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATTATACACCGAGACATAAAATCCAGCAACATTTTACTTGATGGAAACTTGGATGCTCGAGTATCTGATTTTGGACTTGCAAAACTGCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCCGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGTCTGATGTGTATAGCTTTGGTGTGCTGACACTTGAAGTGCTGAGCGGAAAGCGGCCAACAGATGCAGCATTCATTGAAAAAGGTCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACCGAAAATAGGCCGAGGGAGATTGTTGACCCACTATGTGAAGGGGTGCAAGTGGAGAGCCTTGATGCCTTGCTCTCTGTGGCTATTCAGTGTGTCTCCTCAAATCCAGAAGATCGACCCACTATGCACCGAGTAGTGCAATTGTTCGAATCAGAGGTCGTAACTCCATGCCCTAGTGACTTCTATGACTCCAACTCCGATTAG 1587 0.4247 MAFIHRNPGEVLLSFRTAVVNSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLENMRVLALHNNNFYGTIPSELGNCTALEGIFLQAMYQPIFWSDLYLLMVSLATLLEARNFVGNRGLCGVKINSTCKDDGSPGANAPYTSSDQNQMGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDSISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERAEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPREIVDPLCEGVQVESLDALLSVAIQCVSSNPEDRPTMHRVVQLFESEVVTPCPSDFYDSNSD 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01113 528 Gene3D Phosphorylase Kinase; domain 1 216 318 - -
Spst2g01113 528 ProSiteProfiles Protein kinase domain profile. 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01113 528 Pfam Protein kinase domain 245 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01113 528 Gene3D Transferase(Phosphotransferase) domain 1 319 516 - -
Spst2g01113 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Spst2g01113 528 ProSitePatterns Protein kinases ATP-binding region signature. 249 275 IPR017441 GO:0005524
Spst2g01113 528 Gene3D Ribonuclease Inhibitor 7 109 IPR032675 -
Spst2g01113 528 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 319 521 - -
Spst2g01113 528 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 217 318 - -
Spst2g01113 528 SUPERFAMILY Protein kinase-like (PK-like) 227 510 IPR011009 -
Spst2g01113 528 SMART serkin_6 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01113 528 SUPERFAMILY L domain-like 7 110 - -
Spst2g01113 528 Pfam Leucine rich repeat N-terminal domain 10 45 IPR013210 -
Spst2g01113 528 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01113 Spst-Chr2 9767272 9783701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01113 9 519 Receptor kinase-like Gene Family AT2G35620 70.397 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Spst2g01113 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01113 - - gmx:100819230 924.85