Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01104 ATGATGAAGGCTATTGCTTCACCAAATAATATTGATCATTTGGCACTGCTCAAGTTCAAGGAATCCATATCTTCTGACCCTTATGGAATCTTATTCTCTTGGAATACTTCTATTCACTTTTGTAACTGGCATGGAATCACATGCAATTCCGCGCTTCAAAGAGTTACAACGTTGAATTTGGAAGGATACAAGTTGAAGGGTTTCATATCTCCTCACATTGCCAATCTCTCATACTTGACAAACTTCAACCTCGACAACAACAACTTGTACGGGAAAATCCCACAAGAATTGGGACGCTTGTCACGGCTGAAGCAACTTTATATTGGAAATAACTCATTGGAAGGAGAAATTCCCACAAACTTGACAGCTTGCACTCATCTGGAAGTCTTATACTTACTTGGGAACAATCTGATTGGCAAAATACCAGTTCAAATTGGTTCATTTCAAAAGCTTCGAAGTCTGAATGTTGGCAAGAACAAGCTCACAGGAGGAATTCCAGCATTCATGGGTAACGTTTCATCCCTAATTTATCTCTCCGTGATTATGAACAACTTAGAGGGAGATATTCCTCAACAGATATGCAATCTCAAAAGCTTGGCATCTGTATTTGTGAGTGTCAACAACCTCACAGGAACATTCCCTTCTTGTCTCTATAATATGTCATCTCTCACAAAGATTTCAGCTTCAGCAAATCAGTTCAATGATTCTCTCTCACCCAACATGTTCCACACCCTCCCCAATCTCCAACTACTTCTACTTGGTGGCAATCGACTCTCAGGTCCAATCCCACCTTCCATCATAAATGCATCTATTATTTCATCATTTGATATTGGTGGAAACTACTTTTCTGGACAAGTTCCAAATATGAGCAAGTTACAATATCTTTATCGTCTATCTTTGCAAAAAAACAATTTAGGTGACAATTCCATTAAGGATTTGGAGTTTTTAAAATCATTGGTAAATTGTAGTAAGTTACAAATTTTGTCTATATCCTACAACAATTTTGGAGGATATTTGCCAAATTCCATAGGAAATTTATCCAGCAAACTCAGTCAACTATATCTCGGAGGTAATCAAATATCAGGAGAAATCCCTGTGACATTAGGAAATTTAGTTGACTTAACTCTCTTGATGATGGAAGATAATTTCATTGGTGGGATTATCCCAACAACTTTTGGGAAGTTTCACAAAATGCAAAAATTAGAATTAGGTACAAACATGCTGTCAGGAGAAATAGGAGCCTTCATAGGCAACCTTAGTCAATTGTTTATGTTGGGTGTGGGACAAAATATGTTGGAAGGAAATATTCCTCCAAATATTGGAAACTGCCAAAAGTTACAACAATTAGATCTTTTTCAAAACAACCTTACAGGCGCCATACCCTTAGAGGTTTTTAATTTGTCCTCTCTCACAAACTTCTTGGATTTGACCCAAAACTCTTTGAGTGGCAGTATACCTGCAGAAGTGGGCAACCTAAAAAATCTCAATTTTCTATCTATGTCTGATAATCATCTGACTGGTCACATTCCTGGAACTATTGGGGAATGCATAATGTTGGAGAACCTCTATTTGGAAGGGAATTCATTGCAAGGAATCATTCCATCCTCTTTGGCATCAGTCAAGAATCTTAGGGCATTAGACCTATCAAGAAACCACTTGTCTGGACCAATTCCAAATGGTCTACAAAATCTGTCTTACTTACAATATTTCAACATATCTTTCAACATGTTGGAAGGTGAAGTACCAACTGAAGGTGTCTTCCAAAATGCAAGTGGACTAGTGGTGACTGGAAACAGTATGCTTTGTGGAGGTATTTCAAAACTGCATCTGCCTCCATGCACTATCAGAGGTAAGAAACTTGCAAAACACCACAAGTTCATATTGGTAACAGTAATAGTTAGTGTGATTGCTTGCCTTCTCATACTGTCAATTATTCTAATCATCTATTGGACGAGGAAGAGGGGTAAGAAACCATCATTTGATTCACCAACAATTGACCAGCTAGCTAAAGTTTCATACCAAAGCCTGCACAACGGAACTGATGGGTTCTCAACGACAAACTTGATAGGGTCTGGAAGTTTTAGCTCTGTCTACAAAGGAACTCTCGAGTCAGAAGACAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAGAAAAGGAGCTCACAAGAGTTTCATTGTTGAATGCAATGCACTTAAGAATATCAAACATCGAAATCTTGTTCCTATTTTGACATGTTGTTCTAGTACCGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTCGAATACATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCTGGGACACTAAGTGCAGAGAATCCTAGAACATTGAGCCTTGATCAAAGATTAAACATCATAATTGATATTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAATCGATCATTCACTGTGACTTAAAACCCGGGAATGTCCTACTTGATGATGATATGGTTGCTCATGTGAGCGATTTTGGCATGACAAGACTTCTCTCAACAATTAATGGTACCACTTCTAAGCAAACAAGTACAACTGGAATAAAGGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAGTGGGTTCTGAGGTGTCCATGAATGGTGACGTATATAGCTTTGGGATTCTTATGTTGGAAATTCTCACTGGAATAAGACCCACGGATGAAAGCTTTGAAGATGGTCAAAATTTGCGCAACTTTGTGGAAAATTCACTTCCTGATAATGTTCTACAGATTTTGGATGCATCTTCCCTAAAGCAGAGACAGCCAATAGTAGAAGAAGAAAATAGTCTGAACCTTACTCCAACTGTTGAAAACTGTTTAGTTTCACTCTTTAATATTGGACTTGCTTGTTCAGTGGAGTCACCAAAAGAAAGATTAAACATGGAGAATGTTACAAGAGAGTTAAGCAAAATCAAAGGAGCCTTTCTTTCCGGTAAGATAAATGGAAAATGA 2991 0.3801 MMKAIASPNNIDHLALLKFKESISSDPYGILFSWNTSIHFCNWHGITCNSALQRVTTLNLEGYKLKGFISPHIANLSYLTNFNLDNNNLYGKIPQELGRLSRLKQLYIGNNSLEGEIPTNLTACTHLEVLYLLGNNLIGKIPVQIGSFQKLRSLNVGKNKLTGGIPAFMGNVSSLIYLSVIMNNLEGDIPQQICNLKSLASVFVSVNNLTGTFPSCLYNMSSLTKISASANQFNDSLSPNMFHTLPNLQLLLLGGNRLSGPIPPSIINASIISSFDIGGNYFSGQVPNMSKLQYLYRLSLQKNNLGDNSIKDLEFLKSLVNCSKLQILSISYNNFGGYLPNSIGNLSSKLSQLYLGGNQISGEIPVTLGNLVDLTLLMMEDNFIGGIIPTTFGKFHKMQKLELGTNMLSGEIGAFIGNLSQLFMLGVGQNMLEGNIPPNIGNCQKLQQLDLFQNNLTGAIPLEVFNLSSLTNFLDLTQNSLSGSIPAEVGNLKNLNFLSMSDNHLTGHIPGTIGECIMLENLYLEGNSLQGIIPSSLASVKNLRALDLSRNHLSGPIPNGLQNLSYLQYFNISFNMLEGEVPTEGVFQNASGLVVTGNSMLCGGISKLHLPPCTIRGKKLAKHHKFILVTVIVSVIACLLILSIILIIYWTRKRGKKPSFDSPTIDQLAKVSYQSLHNGTDGFSTTNLIGSGSFSSVYKGTLESEDKVVAIKVLNLQRKGAHKSFIVECNALKNIKHRNLVPILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPGTLSAENPRTLSLDQRLNIIIDIASALHYLHHECEQSIIHCDLKPGNVLLDDDMVAHVSDFGMTRLLSTINGTTSKQTSTTGIKGTVGYAPPEYGVGSEVSMNGDVYSFGILMLEILTGIRPTDESFEDGQNLRNFVENSLPDNVLQILDASSLKQRQPIVEEENSLNLTPTVENCLVSLFNIGLACSVESPKERLNMENVTRELSKIKGAFLSGKINGK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01104 996 ProSiteProfiles Protein kinase domain profile. 683 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01104 996 Pfam Leucine rich repeat N-terminal domain 12 49 IPR013210 -
Spst2g01104 996 SMART LRR_typ_2 540 563 IPR003591 -
Spst2g01104 996 SMART LRR_typ_2 100 124 IPR003591 -
Spst2g01104 996 SMART LRR_typ_2 220 244 IPR003591 -
Spst2g01104 996 SMART LRR_typ_2 492 516 IPR003591 -
Spst2g01104 996 SMART LRR_typ_2 245 269 IPR003591 -
Spst2g01104 996 SMART LRR_typ_2 371 394 IPR003591 -
Spst2g01104 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 765 993 - -
Spst2g01104 996 Gene3D Ribonuclease Inhibitor 132 239 IPR032675 -
Spst2g01104 996 Pfam Protein tyrosine and serine/threonine kinase 686 981 IPR001245 GO:0004672|GO:0006468
Spst2g01104 996 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 11 122 - -
Spst2g01104 996 Gene3D Ribonuclease Inhibitor 240 318 IPR032675 -
Spst2g01104 996 Gene3D Transferase(Phosphotransferase) domain 1 765 989 - -
Spst2g01104 996 SUPERFAMILY L domain-like 11 305 - -
Spst2g01104 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Spst2g01104 996 Gene3D Ribonuclease Inhibitor 319 614 IPR032675 -
Spst2g01104 996 SUPERFAMILY L domain-like 349 603 - -
Spst2g01104 996 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Spst2g01104 996 FunFam Leucine-rich repeat receptor protein kinase EMS1 141 240 - -
Spst2g01104 996 SUPERFAMILY Protein kinase-like (PK-like) 658 981 IPR011009 -
Spst2g01104 996 ProSiteProfiles Leucine-rich repeat profile. 299 320 IPR001611 GO:0005515
Spst2g01104 996 SMART serkin_6 683 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01104 996 Gene3D Phosphorylase Kinase; domain 1 664 764 - -
Spst2g01104 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 311 619 - -
Spst2g01104 996 Gene3D Ribonuclease Inhibitor 12 125 IPR032675 -
Spst2g01104 996 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Spst2g01104 996 Pfam Leucine rich repeat 519 577 IPR001611 GO:0005515
Spst2g01104 996 Pfam Leucine Rich Repeat 324 346 IPR001611 GO:0005515
Spst2g01104 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 655 764 - -
Spst2g01104 996 PANTHER OS04G0122200 PROTEIN 195 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01104 Spst-Chr2 9726374 9729451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01104 9 991 Receptor kinase-like Gene Family AT3G47570 44.689 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst2g01104 PK_Tyr_Ser-Thr 5.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01104 - - gmx:100801459 1446.03