Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01103 ATGATTGCTTTTGCATTACCAAATAATACTGATCATTTGGCACTGCTCAACTTCAAGGAGTCCATATCTTCTGACCCTTATGGAATCTTACTCTCTTGGAATACTTCTATTCACTTTTGTAACTGGCATGGAATCACATGCAATTCCATGCTTCAACGAGTTACAAAGTTGAATTTAGAAGGATACCAATTGAAGGGATTCTTATCTCCACACATTGGAAATATCTCATACATGACAAACTTCAACATCATGAACAACAACTTCTATGGGGAAATCCCACAAGAAGTTGGACGATTGTCACAATTGCAGAAACTCTTCATCGGAAATAACTCATTTGTAGGAGAAATTCCTACAAATTTGACAGGTTGCACTGATCTCACTATCTTATACTTATTTGGAAACAATTTGTTTGGTAAAATACCAATCCAAATTGGCTCATTTAAAAAACTTCATAGTTTGAATGTTGGGAAGAACAAGTTAACAGGAGGAATCTCACCTTTCATAGGGAATGTTTCATCCCTGATTTATCTCTCCGTGCTTGTGAACAACTTAGAGGGAGATATTCCTCAACAGATATGCAATCTCAAAAGCTTGGCATTTGTATACGTGAGTGCGAACAAGCTGACTGGAACATTTCCTTCTTGTCTCTACAATATGTCGTCTCTCACTGATATTGCAGCATCACTAAATCAATTCAATGGCTCTCTTCCACCCGATATGTTCTACACTCTTCCCAATCTCCGGTTATTTGTAATTGGTGCCAATCAAATTTCAGGTCCAATTCCATATTCCATCACAAATGCATCCATCCTTTCATCACTTCAGATCTCTGGAAACTATTTCACAGGACAAGTTCCAAGTTTGGGGAAGCTACAACATCTATCATTCATTTCTTTGGAAAACAACAGTTTAGGTGACAATTCATTTCATGATTTAGAATTTTTAAAATCCTTGACAAACTGCAGTAAGTTGCAACATTTGGCTATGTCTCTCAATAATTTTGGAGGTCATTTGCCCAATTCCATGGGCAATTTATCCACCCAACTCACTCAACTATATCTGGGAGGCAATCACATATCAGGAGAAATTCCTACATCGCTAGGAAATTTAATTGGCTTAAATCTCTTGATGATAGAACATAACAACATTAGTGGGACTATCCCATCAACTTTTGGGAAGTTTCAGAAAATGCAAAAGATGTCATTGGGTGCAAACAAACTGTCAGGAAAAATAGGAGCCTTCATGGGCAACCTTAGTCAATTGTTTTTTTTGGGCATGGAACAAAATATGTTACAAGGAAATATTCCTCCAAGTATAGGAAACTGCCAAAAGTTACAAGAACTGGATCTTTATCAAAACAACCTTACTGGAACCATACCCTTGGAGATCTTCAATCTGTCATCTCTAACTTACTTTTTTGATTTGAGTCAAAACACTTTGAGTGGTAGCATACCAGAAGATGTGGGGAATCTAAAACACGTCGATTATCTATCTCTGGCTAACAACTATTTGTCTGGTCACATTCCTAGTACTATCGGGGAATGCATAATGTTGGAGTACCTCTTTTTGCAAGGAAATTCCTTAGAAGGAATCATACCATCTTCTTTGACATCACTCAAAAGCCTTCAAGGTTTAGACCTGTCACATAACCACTTGTCCGGATCAATTCCTAATGTTCTGCAGAACATTCCTTTATTACTATATTTCAACCTATCTTTTAACATGTTGGACGGTGAGGTACCAACTGAAGGTGTCTTTCGAAATGTAAGTGCGTTAGACGTGACTGGGAATATTAAGCTCTGTGGAGGTATCTCAGAACTGCATCTACCACCATGTCCTGTCAAAGCTAAGAAACTTGCTAAACACCACAAGTTTAGGTTGATTGCAGTGATAGTTAGTGCGGTTGTTTTTCTTCTCATTCTGTCATTTATTTCAATGATCTGCTGGATGAGAAAAGGGAAGAAATCATCATTTGAGTCACCAACAATTGACCAACTGGCTAAAGTTTCATACCAAAGTCTGCACAACGGAACCAATGGTTTCTCAACTACAAACATGATAGGTTCTGCAAATTTTAGCTCTGTCTACATAGGAACTCTCGACTTAGAAGACAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAAAGTAAAGGAGCTCACAAGAGTTTCGTTGCTGAATGCAATGCACTTAAAAATGCTAAGCATCGAAATCTGGTTAAGATTTTGACGTGTTGTTCTAGCACAAATTACGAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAGAAATGGAAGCTTGGAGCAATGGCTGCATCCTACAACATTAAATACAGAGCATCCGAGAACATTGAGCCTTGATGAAAGATTGAATATCCTGATTGATATTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAATCGATCATTCACTGTGACTTAAAGCCTAGCAATGTCCTGCTTGATGATGACATGATTGCTCATGTCAGTGATTTTGGCATAGCAAAACTTCTCTCAACCATTACTAGCGAAACTTCTAAGCAAACAACTTCAACTGGAATAAAAGGGACGGTGGGTTATGCTCCCCCAGAGTATGGAATGAGCTCTAAGGTGTCTATGAATGGCGACATGTACAGTTTTGGAATTCTTATGTTGGAAATGTTTACAGGAAGGAAACCCACAGATGAAATCTTTGAGGATGGTCAAAATTTGCATAATTTTGTGAAAATTTCATTTCCTAATAACATTTTACAGATTTTGGACCCGTCACTTGTAGCAGAACAAGGACAAGCAACACCAGGAGAAGAAAACACTCAGAAACTTACTACAACCATTGAAAAGCACTTCATTTCAGTCATTAGAATTGGACTTGCATGCTCAGTAGAGTCCCCAAACGAAAGAATGAATACGGTGGATGTCTCTAGAGAGCTAAACAAAATCAAAAGAGTTTTTTTGGCTGGTAAGATAAATGGAAAATGA 2988 0.3775 MIAFALPNNTDHLALLNFKESISSDPYGILLSWNTSIHFCNWHGITCNSMLQRVTKLNLEGYQLKGFLSPHIGNISYMTNFNIMNNNFYGEIPQEVGRLSQLQKLFIGNNSFVGEIPTNLTGCTDLTILYLFGNNLFGKIPIQIGSFKKLHSLNVGKNKLTGGISPFIGNVSSLIYLSVLVNNLEGDIPQQICNLKSLAFVYVSANKLTGTFPSCLYNMSSLTDIAASLNQFNGSLPPDMFYTLPNLRLFVIGANQISGPIPYSITNASILSSLQISGNYFTGQVPSLGKLQHLSFISLENNSLGDNSFHDLEFLKSLTNCSKLQHLAMSLNNFGGHLPNSMGNLSTQLTQLYLGGNHISGEIPTSLGNLIGLNLLMIEHNNISGTIPSTFGKFQKMQKMSLGANKLSGKIGAFMGNLSQLFFLGMEQNMLQGNIPPSIGNCQKLQELDLYQNNLTGTIPLEIFNLSSLTYFFDLSQNTLSGSIPEDVGNLKHVDYLSLANNYLSGHIPSTIGECIMLEYLFLQGNSLEGIIPSSLTSLKSLQGLDLSHNHLSGSIPNVLQNIPLLLYFNLSFNMLDGEVPTEGVFRNVSALDVTGNIKLCGGISELHLPPCPVKAKKLAKHHKFRLIAVIVSAVVFLLILSFISMICWMRKGKKSSFESPTIDQLAKVSYQSLHNGTNGFSTTNMIGSANFSSVYIGTLDLEDKVVAIKVLNLQSKGAHKSFVAECNALKNAKHRNLVKILTCCSSTNYEGQEFKALVFEYMRNGSLEQWLHPTTLNTEHPRTLSLDERLNILIDIASALHYLHHECEQSIIHCDLKPSNVLLDDDMIAHVSDFGIAKLLSTITSETSKQTTSTGIKGTVGYAPPEYGMSSKVSMNGDMYSFGILMLEMFTGRKPTDEIFEDGQNLHNFVKISFPNNILQILDPSLVAEQGQATPGEENTQKLTTTIEKHFISVIRIGLACSVESPNERMNTVDVSRELNKIKRVFLAGKINGK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01103 995 Gene3D Ribonuclease Inhibitor 304 613 IPR032675 -
Spst2g01103 995 Pfam Protein kinase domain 683 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01103 995 Gene3D Ribonuclease Inhibitor 134 240 IPR032675 -
Spst2g01103 995 Gene3D Ribonuclease Inhibitor 10 125 IPR032675 -
Spst2g01103 995 Gene3D Ribonuclease Inhibitor 241 292 IPR032675 -
Spst2g01103 995 FunFam LRR receptor-like serine/threonine-protein kinase EFR 652 762 - -
Spst2g01103 995 SUPERFAMILY L domain-like 9 304 - -
Spst2g01103 995 ProSiteProfiles Leucine-rich repeat profile. 541 563 IPR001611 GO:0005515
Spst2g01103 995 PANTHER OS04G0122200 PROTEIN 193 984 - -
Spst2g01103 995 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 8 162 - -
Spst2g01103 995 SMART serkin_6 681 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01103 995 Pfam Leucine rich repeat 518 576 IPR001611 GO:0005515
Spst2g01103 995 Gene3D Transferase(Phosphotransferase) domain 1 763 989 - -
Spst2g01103 995 ProSiteProfiles Protein kinase domain profile. 681 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01103 995 FunFam Leucine-rich repeat receptor protein kinase EMS1 166 262 - -
Spst2g01103 995 Pfam Leucine rich repeat N-terminal domain 9 48 IPR013210 -
Spst2g01103 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 763 992 - -
Spst2g01103 995 SUPERFAMILY L domain-like 347 602 - -
Spst2g01103 995 Gene3D Phosphorylase Kinase; domain 1 662 762 - -
Spst2g01103 995 FunFam LRR receptor-like serine/threonine-protein kinase EFR 310 618 - -
Spst2g01103 995 SUPERFAMILY Protein kinase-like (PK-like) 656 979 IPR011009 -
Spst2g01103 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01103 Spst-Chr2 9716542 9719641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01103 8 987 Receptor kinase-like Gene Family AT3G47570 45.161 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst2g01103 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01103 - - gmx:100801459 1442.94