Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01100 ATGAATAGATCGTTTTTTCGAATGGAGAGTGGGGGAATTAGACAGTGGTTGAACCTTCTGGTGTGTGCACTGCTGTTGTTGATGGCAGAAGCTTCTTATGTGCCTATCACCTATCTTCAGAACGCGGTAGCGAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAGGGGATCTGGAACAGGGATTAACAATTGGTTGGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTTCTCGCAAGACCAACCGTTTAGGTTCATCTAAGCAAATGGCAAAGCAAATTGCCTTTTCAGGAATTATGAGTAACAGGCAAATGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCTTTTACTGGCGATGTTGAAGCAGTCAATCCAGTAACTAAGTTGCACTTTAGGGGAGCAAGGATTTTTGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATTTCTGGTTGTTCAGCTGGAGGATTAACTTCAGTACTTCATTGTGATAGCTTCCGCGCTCTATTACCTAGAGGAGCTAGAGTGAAATGCCTCTCAGATGCTGGTTATTTTATCAATGCAAGGGATGTCACTGGAGCATACCACATTGAACAGTATTTCAGTCAAGTTGTTGCTACACATGGCTCTGCAAGGAATTTGCCTCAGTCATGCACTTCAAGACTTAGCCCAAAGCTGTGCTTTTTTCCACAATATTTGGTGTCACATATCACTACGCCAATCTTCTTTGTAAACGCCGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCATAGCTGTAAGCTTGATATAAACAACTGCTCACCTGATCAACTCGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCGTTGACTGTGCTAGGCAACTCTTCATCTAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCCCCAGAGCTGAAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAATGGCTTTCCATCAGATAGATTGCCCATACCCTTGCAACCCCACTTGTCACAACCGCGTTTTCGAACCACAAGACGACCACCCAGGAAAAAATGTGACCACGAAAGGAACAACAAATGCATCAGCAGCCAGAAAGCGCAATTTCCCGAGACTAACAAAAAAGGCACAATGGATCGAGCTTGTGTGCATTAATCGAGGGATCGGTGGTCTTCTAACGTTGGTTCTTCTGCATTCGTTTCCAGAGTTTTTGGTTGTTGAGATGGGGTCCAGTGGCAGCAAAGCCACGTCATCATCGTCTTCTTCGGGGAGTTTCAGGAAGGGTCGATCTAAGGGGCACAGAGGTTTCCCGTCTTATTGTCTGGGAACGTCGTCTGGATCTCATGACATTGATAGTGATGACCAGGTTTGTGATCAACATAAAGTAAATGGAGATGATGCGACATACACCAGTGGCAATGGAATAGACTCAGATGAAGGGAAGACAGAGTCTTTTAGAAAGGTGAAATCGAATAAATCTGATGAAGTGCCTTCTAACATTGACCTTGAAGAGTGGGGCCACACTGCATCCAGAACCGGTAGCAGCTCTGCACATTCTTCTTCAAATCAGTCCTTGAACCCTTCAAGTCGGTTCCTGTCTCGCTTTAGCCTTGTTCCTGGTAATATAAGCTTCAGACTTAGCAGAACCACAAGTCTGGGGTCGTCTAGGCCTTGCCCAGTTTCTTCAACGAGTCTCTCTATCTTTAATGATGAAGATGAGCTTAGTCTTCATCGAGGGCCTCCTGGCAGCTTGATGAATAGAAATGAAACTCAACGCCGTAGTGATTTACAGTGTCATCGTGAAGAAGCTTCTAATAATTTACGACCCAATGCCCCGGCATTGGTTTCGCCTGGTAATTTGATTAGCAATCGCCCACTTTCTTCTGTTCAGGATGTGGTTAGAGATAGAAATGGTACAAGAGAAGGGCCTGATGTCAACATGTTTTCTCCAAGAATACATACTGATACAGAAAATATTGAAACTAGACATACTGATAGACGAAATGGAGCTCGAGAACCTGTTGAGCGTAATGTTCGTTTTAGCAGAACTTTAAGTGTTGGAAGGCTCCGTGACAGAGTTCTCCGCAGATCAACATTGTCAGACTTCACCTTTTGCCCTATGCAACGAGAGAGAGAAGTAAGAGATGCTGGTCAAGACAATGGAAGACGAGTAGGGGACAGAGACACAAGAGTGTCACCAAGTGGTCGTAATGCTTCAAATTCTTCTACACCTAGATATCCCCTACCCAGTACACCTAGCTCCTTGTTTGGCATCCAAGACTTTGATGTTGAGACTTCACGTTCTAGAGAAACTAGGTATCAGGATCTACTGGAACATAGGTCCAATTTCCTGGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAGCGTTTGGGAAGCCGGTTTGAAAATCTTTCTGGACATGACAGATCATGTATCTTATCTGGTCAACATAGAAACGGTCGTTGTGCATGCAGAAACAATAGTCGTGATACCAATTCAAATGATGATACCAATGCTAGAGCTAGCATATCAAGAATTGTTATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTGGTTTTATCTTCTCGCCCTTCTGTGTCATCTATCGGTTCTGTTCCTGCACCTAACGAAGTTGTGGAATCCTTGCCTGTCAAATTATACACAAAGTTGCACAAACATCAAGAAGAACCTGTACAATGTTATATATGCCTTGTGGAGTACGAGGATGGAGACAGCATGAGAGTTCTGCCTTGTCATCATGAATTTCATACAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGTTCATTGGACCCTGCTAAAATAATTGATGGAATTCCTTTGCATCTTAAAATTGAGCTATATATGTCCTGA 3075 0.4358 MNRSFFRMESGGIRQWLNLLVCALLLLMAEASYVPITYLQNAVAKGAVCLDGSPPAYHFDRGSGTGINNWLVAFEGGGWCNNVTTCLSRKTNRLGSSKQMAKQIAFSGIMSNRQMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVMEDLLAKGMKNARNAIISGCSAGGLTSVLHCDSFRALLPRGARVKCLSDAGYFINARDVTGAYHIEQYFSQVVATHGSARNLPQSCTSRLSPKLCFFPQYLVSHITTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRALTVLGNSSSKGMFIDSCYAHCQTEMQETWLRSDSPELKKTTIAKAVADWFYERMAFHQIDCPYPCNPTCHNRVFEPQDDHPGKNVTTKGTTNASAARKRNFPRLTKKAQWIELVCINRGIGGLLTLVLLHSFPEFLVVEMGSSGSKATSSSSSSGSFRKGRSKGHRGFPSYCLGTSSGSHDIDSDDQVCDQHKVNGDDATYTSGNGIDSDEGKTESFRKVKSNKSDEVPSNIDLEEWGHTASRTGSSSAHSSSNQSLNPSSRFLSRFSLVPGNISFRLSRTTSLGSSRPCPVSSTSLSIFNDEDELSLHRGPPGSLMNRNETQRRSDLQCHREEASNNLRPNAPALVSPGNLISNRPLSSVQDVVRDRNGTREGPDVNMFSPRIHTDTENIETRHTDRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTLSDFTFCPMQREREVRDAGQDNGRRVGDRDTRVSPSGRNASNSSTPRYPLPSTPSSLFGIQDFDVETSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCACRNNSRDTNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKLYTKLHKHQEEPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEIHSSLDPAKIIDGIPLHLKIELYMS 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01100 1024 MobiDBLite consensus disorder prediction 520 534 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 768 786 - -
Spst2g01100 1024 Pfam Pectinacetylesterase 29 378 IPR004963 GO:0016787
Spst2g01100 1024 FunFam Putative RING zinc finger domain superfamily protein 935 1005 - -
Spst2g01100 1024 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 464 1001 - -
Spst2g01100 1024 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 929 1003 IPR013083 -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 768 810 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 564 584 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 467 482 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 535 557 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 788 810 - -
Spst2g01100 1024 SMART ring_2 966 1005 IPR001841 -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 520 584 - -
Spst2g01100 1024 SUPERFAMILY RING/U-box 944 999 - -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 657 678 - -
Spst2g01100 1024 Pfam RING-like zinc finger 965 993 IPR001841 -
Spst2g01100 1024 ProSiteProfiles Zinc finger RING-type profile. 966 996 IPR001841 -
Spst2g01100 1024 MobiDBLite consensus disorder prediction 467 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01100 Spst-Chr2 9683466 9696680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01100 13 405 Carbohydrate Esterase AT4G19420 62.617 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01100 K19882 - gmx:100815830 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01100 2 9683466 9696680 Spst2g01100 2 9683466 9696680 ECH
Spst2g01100 2 9683466 9696680 Spst3g03626 3 86313381 86315994 PCT
Spst3g03627 3 86324742 86329797 Spst2g01100 2 9683466 9696680 PCT