Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01099 ATGAAGAGCATAAACGACGACGCTTCGACGCAAGATCTCGACCCTCAGAGCGACCACAGCTCCGATTACTTAGCTCACCCAAACTCTCACCCCCAACCCCACCCTCACCCTCGCCGTCCCCGGGGTTTCGCGGCGGCGGCGGCGGCGGCGGCCACCACCAATTCCCCCGCCAAGGGAAAGAAGGAGAGAGAGAAGGAGAAGGAGCGCACCAAGCTCCGCGAGCGACACCGCCGAGCCATCACCAGCCGCATGCTCGCCGGCCTCCGCCAGTACGGCAATTTTCCTCTGCCTGCACGTGCCGACATGAACGACGTACTCGCCGCGCTGGCACGTGAGGCTGGTTGGGTTGTCGACGCCGACGGCACCACCTACCGCCAGTGCCCCCCTCCCTCTCACATGGGGTCATTTGCGGCTAGGTCAGTTGAAAGTCAACTCTCTGGTGGTTCTTTGAGGAATTGTTCTGTTAAGGAAACTATTGAGAATCAGACATCTGTGCTTAGAATTGATGAATGCTTGTCGCCTGCGTCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCAAAGAGTGAGAAGTATACAAATGCGAGCCCCATCAATACTGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGATTTTACTGGCACACCATATGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAATTGATTGATCCTGACGGCATTAGGCAGGAGCTAATCCATATCAAGTCTTTAAATGTAGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCTCACAGAAATATGTGTGGTCTGGTTATAGGGAGCTTTTTAACTTTGTTAGAAAATTCAAACTTAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGATATATTCTTCACAGATCGTGAAGGACGGAGGAATACTGAATGCCTTTCTTGGGGGATTGACAAAGAACGAGTTCTTAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCCGTTGAAGTTGGACTTGGAGCATCTGGAGAGCTGAAATATCCTTCTTTCTCAGAAAGAATGGGATGGCGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTCCGGAGGGCAGCCAAATTACGTGGACATTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACATTACAATTCTTTGCCGCATGAAACTGGATTCTTTAGTGAGCGAGGTGATTATGACAACTACTATGGACGATTCTTCTTACATTGGTACTCCCAGACATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAACCCTTGCTTTCGAGGAGACAAAAATAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCTACAAATCAAGATGGGTACTCTCCTGTGTTTGAGGTTCTAAGAAAACATGCCGTCACCATGAAATTTGTCTGCTTAGGGTTTCATCTTTCCAGCCAGGAACCTAATGAATCATTGATTGATCCAGAGGGTCTGAGTTGGCAGGTGTTAAACTCAGCTTGGGATCGGGGGTTGATGGCTGGTGGCGAGAATGCACTCCTTTGCTATGATAGAGAAGGGTACAAGAGATTAGTTGACATGGCAAAGCCGAGACATGATCCTGATCATCGACACTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTGCAGGCAAATGTTTGCTTGTCTGAATTGGATTTCTTCGTCAAATGCATGCATGGTGAGATGACAGAACTGTAA 1980 0.4687 MKSINDDASTQDLDPQSDHSSDYLAHPNSHPQPHPHPRRPRGFAAAAAAAATTNSPAKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPPPSHMGSFAARSVESQLSGGSLRNCSVKETIENQTSVLRIDECLSPASIDSVVIAERDSKSEKYTNASPINTVDCLEADQLMQDIHSGVHENDFTGTPYVPVYVKLPAGIINKFCQLIDPDGIRQELIHIKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNFVRKFKLKLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEVGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSLPHETGFFSERGDYDNYYGRFFLHWYSQTLIDHADNVLSLATLAFEETKIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLRKHAVTMKFVCLGFHLSSQEPNESLIDPEGLSWQVLNSAWDRGLMAGGENALLCYDREGYKRLVDMAKPRHDPDHRHFSFFVYQQPSLLQANVCLSELDFFVKCMHGEMTEL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01099 659 MobiDBLite consensus disorder prediction 1 74 - -
Spst2g01099 659 Pfam BES1/BZR1 plant transcription factor, N-terminal 58 204 IPR008540 -
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 283 301 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 505 521 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 398 420 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 471 490 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 305 326 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 600 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 262 276 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 540 563 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 522 533 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 MobiDBLite consensus disorder prediction 1 27 - -
Spst2g01099 659 SUPERFAMILY (Trans)glycosidases 222 656 IPR017853 -
Spst2g01099 659 Gene3D Glycosidases 218 659 - -
Spst2g01099 659 Pfam Glycosyl hydrolase family 14 247 619 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 161 655 IPR001554 GO:0000272|GO:0016161
Spst2g01099 659 MobiDBLite consensus disorder prediction 57 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01099 Spst-Chr2 9673201 9680685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01099 14 658 Glycoside Hydrolase AT5G45300 66.220 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Spst2g01099 Glyco_hydro_14 1.3e-87 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01099 K01177 - gmx:100777004 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01099 2 9673201 9680685 Spst2g01099 2 9673201 9680685 ECH