Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01097 ATGAATACTTTTATTCTTGTGTTTCCTTCATTTTGTTCTGTAGCATGCCTTCCCATGCTTCTCCTCTTTATTATCAACTCTCTCTTGTGTCTCCCAAACACCACTGCCTCTATATTAGGAAACCAGACGGACCATTTGGTGTTGCTCAAATTTAAGGAATCAATATCAAATGACCCTTTTAAAATCACTGCCTCTTGGAATAGTTCCATCCATTTTTGCAAGTGGCCTGGAGTTACATGTAATTCCATGAACCAAAGAGTTATAGAGTTAAACCTTGAAGGAAAAAAGTTGCAAGGTTTTCTACCACCCCATATAGGCAATCTCTCTTTCCTAACCAGCCTTAACCTTGGAAACAACAGCTTCTGTGGAAAAATTCCACAAGAAATGGGTCGGTTGTTACAGTTACAAAACTTATCTCTCACCAATAACTCATTCAAAGGAGAAATACCTACAAACTTGACAAGCTGTTCAAACCTTAGAGAGTTACACTTGTTTGGTAACAATTTGATTGGAAAAATACCAATGGAAATTGGCTCCCTGCAGAAGCTTCAAGAAATGACACTGGCAGTAAACAATCTAACAGGAGCAATCCCACCTTCCATAGGGAATCTTTCATCCCTCGTTTCTCTCTCAATCGGTGTCAATCACTTGGAGGGATATATTCCACAAGAAATTTGTCACCTCAAAAACTTATCATTGATATCATTGCATGTCAACAAGCTCATAGGTACATTTCCTTCTTGTCTTTACAACATGTCGTCTCTTACCATAATCTCAGCTGCAGACAATCAATTTAATGGCTCTCTTCCACCAAACATGTTCCACACCCTCCCTAATCTCCGAGAATTCCTTGTTGGCGGGAATCATATCTCAAGTTCAATCCCAACTTCCATTACAAATGCTTCTGTCCTCCAAACACTTGATGTTGGTACAAATCATTTTGTGGGCCAAGTTCCAAGTCTAGGAAAGCTGCAATACCTTTGGTTCCTTAGTCTGTACAGCAACAACTTAGGTGACAATACGACAATGGACTTGGAGTTTTTAAAATCCTTGGCCAATTGTAGCAAGTTGGAAGTGGTTTCTATTTCCTATAATAATTTTGGAGGTAGTTTGCCAAATTTTATGGGAAATTTATCCTCCAAACTTAGTCAATTATATCTCGGGGGTAATCACATATCGGGAAAAATTCCTGCAGAATTAGGCAATCTAGTTAACTTGACTATCTTGACCATGGAAATTAACCAGTTTGAAGGGATTATTCCAGCCACTTTTGGGAAGCTCCAGAAGCTACAAAAGTTGGAGTTGAGTAGCAACAAGTTGTCAGGAGATATTCCAGATTTTGTTGGCAACCTTACTCAGTTGTATTATTTGGGGATGGCAGAAAATATGTTAGAAGGAAAAATTCCTCCGAGTATAGGAAACTGTCAAAAGTTACAATACCTTAACCTTTGGAAAAACAACCTTAGAGGAAGCATACCCTTAGAGATTTTTAGTCTTTTCTCTTTAACAAACTTGTTGGACTTGTCACAAAATTCATTGAGTGGCAGCCTTCCTGACGAAGTTGGCCGGTTAAAAAATATTGGGAAGATGAGTGTGGCTGAAAATAATTTGTCCAGTGAAATTCCTGAAACCATTGGAGACTGCATAAGCTTGGAGTACCTTTGTCTACAAGGAAATTCCTTTCACGGAATCATACCTTCCTCTTTGGCTTCACTCAAAGGTCTTCGAGTATTAGACATGTCACAAAATCTTCTGATCGGATCAATTCCGAAGGATCTACAACATATTTCTTTCTTAGAATACTTCAATGTATCTTTTAACATGTTGGAGGGTGAAGTCCCACTGGAAGGTGTCTTTCGAAATGCAAGTGAGTTAGCCGTTGTTGGGAACAATAAGCTCTGTGGGGGTGTTTCACAGTTGCATCTACCACCGTGTCCGATCAAAGGTAAGAAACCTGCAAAACACTTGAATTTTGTATGCATCGCAATGGTGATAGTTAGTGTGGTTGTTTTTCTTCTCATACTGCCATTTTTTCTATCTATCTACTTGGTGAGGAAAAGAAACCAGAGAAAACCATCATCTGATTTGCCAACAATTGACCAAGTGGATAAGGTTTCATACCAACACCTACATCATGGAACTGATGGGTTCTCAGTTAAAAACTTGATAGGATCTGGAAATTTTGGCTCCGTATACAAAGGGACTATTGAGTTAGAACGAGAGCACGTTGTTGCCATAAAGGTTCTAAACCTTCAAAAGAAGGGAGCTCAAAAGAGTTTCATTGCTGAATGTAATGCCTTAAAAGATATTAGGCATCGAAACTTGGTCAAGATATTAACATGTTGTTCCAGCATAGATCATAGAGGCCAAGAATTCAAAGCTCTTGTTTTTGAGTACATGACAAATGGAAACCTAGAAAGATGGTTGCATCCAGAAATAGAAATCGCAAATTTAAAGCAGCCTGCTAGATCATTAAGCTTTGACCAAAGACTAAATATTATCATTGATGTTGCTTCTGCTTTACACTATCTTCACTACGAATGTGGTCAAGCCATTATTCACTGTGATTTGAAGCCGAATAATGTTCTTCTCGATGATTGTTTGGTAGCTCGTGTAAGCGACTTTGGTTTAGCTAGAAGACTCAAGCCTATTGCAGTTTCTCCAAAACAAACTAGCACTATTGAAATAAAGGGGACAATTGGTTATGCTCCTCCAGAATATGGAATGGGATCTGAGGTGTCTATAGAAGGGGACGTGTACAGCTTTGGAATTCTTGTCTTGGAAATGTTAACCGGGAGAAGACCAATAGATGAAATGTTTGAAGATGGTCTTAATCTCCATAACTACGTCAAGATTTCAATTCCAAACTACCTTTCCCAGATTGTGGACCCGACTATCCTTCTTCCTAAGGGATTTAAGGAGGCTGCTAATTACCAAAACCTCCCCCCTATGCATCCTACAGTGGAGAAATGCTTACTTTCACTTCTTAGGATTGCACTTGCTTGTTCAATGGAGTCGCCAAAAGAAAGAATGAGCATGGTTGATGTCATTAGGGAGATGTATCTGATCAAAAGTTCAATTTCATCATGA 3090 0.3893 MNTFILVFPSFCSVACLPMLLLFIINSLLCLPNTTASILGNQTDHLVLLKFKESISNDPFKITASWNSSIHFCKWPGVTCNSMNQRVIELNLEGKKLQGFLPPHIGNLSFLTSLNLGNNSFCGKIPQEMGRLLQLQNLSLTNNSFKGEIPTNLTSCSNLRELHLFGNNLIGKIPMEIGSLQKLQEMTLAVNNLTGAIPPSIGNLSSLVSLSIGVNHLEGYIPQEICHLKNLSLISLHVNKLIGTFPSCLYNMSSLTIISAADNQFNGSLPPNMFHTLPNLREFLVGGNHISSSIPTSITNASVLQTLDVGTNHFVGQVPSLGKLQYLWFLSLYSNNLGDNTTMDLEFLKSLANCSKLEVVSISYNNFGGSLPNFMGNLSSKLSQLYLGGNHISGKIPAELGNLVNLTILTMEINQFEGIIPATFGKLQKLQKLELSSNKLSGDIPDFVGNLTQLYYLGMAENMLEGKIPPSIGNCQKLQYLNLWKNNLRGSIPLEIFSLFSLTNLLDLSQNSLSGSLPDEVGRLKNIGKMSVAENNLSSEIPETIGDCISLEYLCLQGNSFHGIIPSSLASLKGLRVLDMSQNLLIGSIPKDLQHISFLEYFNVSFNMLEGEVPLEGVFRNASELAVVGNNKLCGGVSQLHLPPCPIKGKKPAKHLNFVCIAMVIVSVVVFLLILPFFLSIYLVRKRNQRKPSSDLPTIDQVDKVSYQHLHHGTDGFSVKNLIGSGNFGSVYKGTIELEREHVVAIKVLNLQKKGAQKSFIAECNALKDIRHRNLVKILTCCSSIDHRGQEFKALVFEYMTNGNLERWLHPEIEIANLKQPARSLSFDQRLNIIIDVASALHYLHYECGQAIIHCDLKPNNVLLDDCLVARVSDFGLARRLKPIAVSPKQTSTIEIKGTIGYAPPEYGMGSEVSIEGDVYSFGILVLEMLTGRRPIDEMFEDGLNLHNYVKISIPNYLSQIVDPTILLPKGFKEAANYQNLPPMHPTVEKCLLSLLRIALACSMESPKERMSMVDVIREMYLIKSSISS 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01097 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 651 - -
Spst2g01097 1029 SUPERFAMILY L domain-like 42 337 - -
Spst2g01097 1029 Gene3D Phosphorylase Kinase; domain 1 698 799 - -
Spst2g01097 1029 Gene3D Transferase(Phosphotransferase) domain 1 800 1028 - -
Spst2g01097 1029 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 346 - -
Spst2g01097 1029 SMART LRR_typ_2 499 524 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 572 595 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 180 204 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 403 426 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 277 301 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 252 276 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 427 451 IPR003591 -
Spst2g01097 1029 SMART LRR_typ_2 108 132 IPR003591 -
Spst2g01097 1029 Pfam Protein kinase domain 718 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01097 1029 ProSitePatterns Protein kinases ATP-binding region signature. 723 747 IPR017441 GO:0005524
Spst2g01097 1029 SMART serkin_6 717 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01097 1029 Gene3D Ribonuclease Inhibitor 41 323 IPR032675 -
Spst2g01097 1029 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Spst2g01097 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 688 799 - -
Spst2g01097 1029 CDD STKc_IRAK 723 1020 - -
Spst2g01097 1029 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 349 1020 - -
Spst2g01097 1029 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Spst2g01097 1029 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Spst2g01097 1029 SUPERFAMILY Protein kinase-like (PK-like) 691 1023 IPR011009 -
Spst2g01097 1029 SUPERFAMILY L domain-like 381 635 - -
Spst2g01097 1029 ProSiteProfiles Protein kinase domain profile. 717 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01097 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Spst2g01097 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 800 1029 - -
Spst2g01097 1029 Gene3D Ribonuclease Inhibitor 339 653 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01097 Spst-Chr2 9661094 9664290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01097 41 1024 Receptor kinase-like Gene Family AT3G47570 46.393 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst2g01097 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01097 - - gmx:100786600 1663.66