Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01093 ATGTTCCACACACTCCCCAATCTCCGAGAACTTTACATTGCTGCCAATCAAATCTCTGGCCCAATCCCACCTTCCATCACCAATGCATCTACATTCTTTTTAGCACTTGAGGCCAGTCGAAACAGTCTCACGGGACAAATTCCAAGCATGGGGAAAGTATCAGGAAAAATTCCTGCAACAATAGGAAATTTAATTGGCTTAACCCTCTTAACGATGGAAAAAAACGGCATTGGTGGAAATATCCCAACAACTTTTGGGAAGTTTCAAAAGATGCAAAAGTTAAATTTGGGTGCGAACAAGCTGTCAGGAGAGACTAGTGCCTACATAGGCAACCTTACTCAATTGTATCATTTGGAATTAGAAGAAAATTTGTTAGACGGGAATATTCCTCCAAGCATAGGAAACTGCCAGAACTTACAGTACTTAGACATGTCACATAACAAACTGACAGGAACCATACCCTTGGACCTTTTCAAGCTTTCCTCTCTAACAAAATTGTTGAATTTGTCACTGAACTCATTGAGTGGTAGCATACCCGAAGAAGTAGGCCACCTAAGAAATCTTGGTTGGCTAGATATGTCTGAGAATCACTTGTCTGGTGGAATTCCTCAAACTATCGGAGATTGCATAGTGTTGGAAAACCTCTATTTGCAAGGGAATTCATTACGAGGAAGCATACCATCCTCTTTGGCAAAACTCAAAGGGCTTCAACGATTAGACCTGTCACGAAATCGCCTGTCTGGTTCAATTCCTAATGTTCTACCAGACATTTCTTTCTTAAAATATTTCAATGTTTCTTTTAACACTTTAGAGGGTGAAGTACCAATCAAAGGTGTCTTTGGAAAAGCAAGTGAGATACTGGTTATGGGAAACAATAAACTTTGTGGGGGAATTTCAGAACTGCATCTACCATCGTGCCCCGTCAAAGGTTATAAACTTGCAAAGCACCACAAGATCAGGTTGATAGCAGGGATCGTTAGTGCGATTGCTTTTCTTCTCATATTGTCAATTATTCTAACTATTTACTGGAGAAGGAAAAGGAGTAAGAAAGTACCTTCGGATTCACCAACCATTGATCAGTTGGCCACAATTTCATATCAAAGCCTACACAATGGAACTGATGGGTTCTTAGCCACAAACTTGATAGGGTCTGGACATTTTAGCTCTGTATACAAAGGAACTCTTAAGGAGTTCGAAGACAAAGTTGTTGCCATAAAGGTCCTAGATCTTCAGAAAAAGGGAGCTCACAAGAGTTTCATTTCCGAATGCAACGCACTAAGAAACATTAAACATAGAAATCTGATTCAGATTTTGACATGTTGTTCCAGTATAGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTTGAGTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCTCAGACACAAAGTGCAGAGCATCCGAGAAAATTGAGTCTTGATCAAAGATTAAACATCATGGTCGATGTCGCCTCTGCATTACATTATCTTCATCATGAATGCCAGCAACCAATAATTCATCGTGATTTAAAGCCAAGTAATGTCCTTCTGGACAATGAGATGGTTGCCCGTGTGAGTGATTTTGGCATAGCAAAACTTCTTTCAACCATCAATGGTACCACTTCTAAGCAAACAAGTACAGTTGGAATAAAGGGGACTCTTGGCTATGTTCCTCCAGAGTATGGAGTGGGTCTTGAAGTATCAACTTCCGGCGACATGTACAGCTTTGGGATTCTTATGTTGGAAATGCTTACAGGAAGAAGTCCCACAGATGAAATGTTTGAAGATGGTCAAAATCTTCGTAACTTCATTATAACTTCATTTCCTGATAATCTTCTGCAGATTTTGGATCCACGACTTATTCCAACATATGAAGCACCACCGTTGAAAGGAAACAATTGGAATCTTGATCCAAATGTTGAGATGTGCTTACTTTCCCTTTTTAGAATTGGACTTTCTTGTTCTTCGGAATCACCAAAAGATAGATTGGATATTGCTGATGTCACTCGGGAGCTTAACAGAATCAGTGAGACCTTTCTCATTGGTATGAATACTTCGGAAGAGTTAAATCTGAAATCAAATGCTGTAGTCATTTAG 2106 0.3955 MFHTLPNLRELYIAANQISGPIPPSITNASTFFLALEASRNSLTGQIPSMGKVSGKIPATIGNLIGLTLLTMEKNGIGGNIPTTFGKFQKMQKLNLGANKLSGETSAYIGNLTQLYHLELEENLLDGNIPPSIGNCQNLQYLDMSHNKLTGTIPLDLFKLSSLTKLLNLSLNSLSGSIPEEVGHLRNLGWLDMSENHLSGGIPQTIGDCIVLENLYLQGNSLRGSIPSSLAKLKGLQRLDLSRNRLSGSIPNVLPDISFLKYFNVSFNTLEGEVPIKGVFGKASEILVMGNNKLCGGISELHLPSCPVKGYKLAKHHKIRLIAGIVSAIAFLLILSIILTIYWRRKRSKKVPSDSPTIDQLATISYQSLHNGTDGFLATNLIGSGHFSSVYKGTLKEFEDKVVAIKVLDLQKKGAHKSFISECNALRNIKHRNLIQILTCCSSIDYKGQEFKALIFEYMTNGSLEQWLHPQTQSAEHPRKLSLDQRLNIMVDVASALHYLHHECQQPIIHRDLKPSNVLLDNEMVARVSDFGIAKLLSTINGTTSKQTSTVGIKGTLGYVPPEYGVGLEVSTSGDMYSFGILMLEMLTGRSPTDEMFEDGQNLRNFIITSFPDNLLQILDPRLIPTYEAPPLKGNNWNLDPNVEMCLLSLFRIGLSCSSESPKDRLDIADVTRELNRISETFLIGMNTSEELNLKSNAVVI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01093 701 PANTHER OS04G0122200 PROTEIN 51 680 - -
Spst2g01093 701 Gene3D Ribonuclease Inhibitor 1 307 IPR032675 -
Spst2g01093 701 ProSiteProfiles Protein kinase domain profile. 376 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01093 701 PRINTS Leucine-rich repeat signature 139 152 - -
Spst2g01093 701 PRINTS Leucine-rich repeat signature 233 246 - -
Spst2g01093 701 SUPERFAMILY Protein kinase-like (PK-like) 349 675 IPR011009 -
Spst2g01093 701 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 49 309 - -
Spst2g01093 701 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 458 - -
Spst2g01093 701 SMART LRR_typ_2 5 29 IPR003591 -
Spst2g01093 701 SMART LRR_typ_2 233 261 IPR003591 -
Spst2g01093 701 SMART LRR_typ_2 112 136 IPR003591 -
Spst2g01093 701 SMART LRR_typ_2 137 160 IPR003591 -
Spst2g01093 701 SMART LRR_typ_2 185 209 IPR003591 -
Spst2g01093 701 Gene3D Transferase(Phosphotransferase) domain 1 459 692 - -
Spst2g01093 701 Gene3D Phosphorylase Kinase; domain 1 357 458 - -
Spst2g01093 701 SUPERFAMILY L domain-like 53 296 - -
Spst2g01093 701 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 459 687 - -
Spst2g01093 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Spst2g01093 701 ProSitePatterns Protein kinases ATP-binding region signature. 382 406 IPR017441 GO:0005524
Spst2g01093 701 Pfam Leucine rich repeat 212 270 IPR001611 GO:0005515
Spst2g01093 701 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Spst2g01093 701 SMART serkin_6 376 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01093 701 Pfam Leucine Rich repeat 135 151 IPR001611 GO:0005515
Spst2g01093 701 Pfam Protein kinase domain 380 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01093 Spst-Chr2 9638009 9640811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01093 8 689 Receptor kinase-like Gene Family AT3G47570 44.589 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst2g01093 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01093 - - gmx:102664380 938.332