Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01070 ATGTATAACACTCTTCGAGTAAGAGATCAAATCTCTCGTTCGCACGCTCCCTCCTCCTCAAATCCTCCTCCCTTCCTCTCACAGAGCCTCAACTGGTGGACCCCACCCCTCTCCCTCCCAACCCTCTCCCTCCCAACCCGCCTCCGGCAGCCTCCTCTACCACCAGCCTCCTCTACCACCAAAACTGGCGCTCCCCTCTCCCTCTCCAACTCGCTCGCCCCCGTCGGTTTATACAACCGTGCCTCCTCCGACCCCCTCGACCCTCATGTGCTCTTCGACCTCTTCGATGACTGCATGGCCTCGCACCGCTGGACCGAGGTCAAGTGCCTCTTCGAGACCTGGGTCCGCGCCCTCGACAAGAATGGCAAACCCAACAGCCCCGACGTCAACCTCTTCAACCACTACCTCCGCGCCAACCTTAATGCTAGGATGCTGCAAACAGGAAATGACGCTCTCCCTGACGACGAATCATATGACTTAGTCATTGGAATGCTCTTTTCCATAGTCCAGACACTTGAGGCCAGTCGAAACAGTCTCACGGGACAAATTCCAAGCATGGGGAAGTTTCAATATCTTGATATCGTATCTCTGTCTTGGAACAATCAGATATCAGGAAAAATTCCTGCAACAATAGGAAATTTAATTGGCTTAACTCTCTTAACGATGGAAAAAAACCGCATTGGTGGAAATATTCCAACAACTTTTGGGAAGTTTCAAAAGATGCAAAAGTTAAATTTGGGTGCGAACAAGCTGTCAGGAGAGATTAGTGCCTACATAGGCAACCTTACTCAATTGTATCATTTGGAATTAGAAGAAAATTTGTTAGAAGGGAATATTCCTCCAAGCATAGGAAACTGCCAGAACTTACAGTACTTAGACCTGTCACATAACAAACTGACAGGAACCATACCCTTGGACCTTTTTAAGCTTTCCTCTCTAACAAAATTGTTGAATTTGTCACTGAACGCATTGAGTGGTAGCATACCTGAAGAAGTAGGCCACCTAAGAAATCTTGGTTGGCTAGATATGTCTGAGAATCACTTGTCTGGTGGAATTCCTCAAACTATCGGAGATTGCATAGAAAAGAGTAAGAAAGTACCTTCGGATTCACCAACCATTGATCAGTTGGCCACAATTTCATATCAAAGCCTACACAATGGAACTGATGGGTTCTTAGCCACAAACTTGATAGGGTCTGGACATTTTAGCTCTGTATACAAAGGAACTCTTAAGGAGTTCGAAGACAAAGTTGTTGCCATAAAGGTCCTAGATCTTCAGAAAAAGGGAGCTCCCAAGAGTTTCATTTCCGAATGCAACGCACTACGAAACATTAAACATAGAAATCTGATTCAGATTTTGACATGTTGTTCCAGTGTAGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTTGAGTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCGAGAAAATTGAGTCTTGATCAAAGATTAAACATCATGGTCGATGTCGCCTCTGCATTACATTATCTTCATCATGAATGCCAGCAACCAATAATTCATCGTGATTTAAAGCCAAGTAATGTCCTTCTGGACAATGAGATGGTTGCCCGTGTGAGTGATTTTGGCATAGCAAAACTTCTTTCAACCATCAATGGTACCACTTCTAAGCAAACAAGTACAGTTGGAATAAAGGGGACTCTTGGCTATGTTCCTCCAGAGTATGGAGTGGGTCTTGAAGTATCAACTTCTGGCGACATGTATAGCTTTGGGATTCTTATGTTGGAAATGCTTACAGGAAGAAGTCCCACAGATGAAATGTTTGAAGATGGTCAAAATCTTCGTAACTTCATTATAACTTCATTTCCTGATAATCTTCTGCAGATTTTGGATCCACGACTTATTCCAACATATGAAGCACCACCGTTGAAAGGAAACAATTGGAATCTTGATCCAAATGTTGAGATGTGCATACTTTCCCTTTTTAGAATTGGACTTTCTTGTTCTTCGGAATCACTAAAAGATAGATTGGATATTGCTGATGTCACTCGGGAGCTTAACAGAATCAGTGAGACCTTTCTCGTTGGTGTTCAGAAAACTCCTGGTGGCCTCATCTTCCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCCTCATTTTTAGCCACTGTCTATTCTGACTACCTTGCTTCTTCTGGTAGAAACTTGAGATGTAATTCAGGAAATGTTGCTCCTGCCGAGCTTCTCTCCCTTGCAAAGTCTCAGGTAATTCTACCCCCTGCATTCCCTTTCATAGTTTCACTTGGTTAG 2301 0.4376 MYNTLRVRDQISRSHAPSSSNPPPFLSQSLNWWTPPLSLPTLSLPTRLRQPPLPPASSTTKTGAPLSLSNSLAPVGLYNRASSDPLDPHVLFDLFDDCMASHRWTEVKCLFETWVRALDKNGKPNSPDVNLFNHYLRANLNARMLQTGNDALPDDESYDLVIGMLFSIVQTLEASRNSLTGQIPSMGKFQYLDIVSLSWNNQISGKIPATIGNLIGLTLLTMEKNRIGGNIPTTFGKFQKMQKLNLGANKLSGEISAYIGNLTQLYHLELEENLLEGNIPPSIGNCQNLQYLDLSHNKLTGTIPLDLFKLSSLTKLLNLSLNALSGSIPEEVGHLRNLGWLDMSENHLSGGIPQTIGDCIEKSKKVPSDSPTIDQLATISYQSLHNGTDGFLATNLIGSGHFSSVYKGTLKEFEDKVVAIKVLDLQKKGAPKSFISECNALRNIKHRNLIQILTCCSSVDYKGQEFKALIFEYMTNGSLEQWLHPRKLSLDQRLNIMVDVASALHYLHHECQQPIIHRDLKPSNVLLDNEMVARVSDFGIAKLLSTINGTTSKQTSTVGIKGTLGYVPPEYGVGLEVSTSGDMYSFGILMLEMLTGRSPTDEMFEDGQNLRNFIITSFPDNLLQILDPRLIPTYEAPPLKGNNWNLDPNVEMCILSLFRIGLSCSSESLKDRLDIADVTRELNRISETFLVGVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGRNLRCNSGNVAPAELLSLAKSQVILPPAFPFIVSLG 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01070 766 FunFam LRR receptor-like serine/threonine-protein kinase EFR 362 473 - -
Spst2g01070 766 SUPERFAMILY Protein kinase-like (PK-like) 365 682 IPR011009 -
Spst2g01070 766 ProSiteProfiles Protein kinase domain profile. 391 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01070 766 SMART serkin_6 391 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01070 766 SUPERFAMILY Six-hairpin glycosidases 685 753 IPR008928 GO:0005975
Spst2g01070 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Spst2g01070 766 SUPERFAMILY L domain-like 163 357 - -
Spst2g01070 766 Pfam Protein kinase domain 395 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01070 766 MobiDBLite consensus disorder prediction 44 65 - -
Spst2g01070 766 Gene3D Transferase(Phosphotransferase) domain 1 474 694 - -
Spst2g01070 766 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Spst2g01070 766 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 162 255 - -
Spst2g01070 766 Pfam Leucine Rich Repeat 288 307 IPR001611 GO:0005515
Spst2g01070 766 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 474 695 - -
Spst2g01070 766 Gene3D Phosphorylase Kinase; domain 1 372 473 - -
Spst2g01070 766 PRINTS Leucine-rich repeat signature 289 302 - -
Spst2g01070 766 PRINTS Leucine-rich repeat signature 335 348 - -
Spst2g01070 766 MobiDBLite consensus disorder prediction 1 24 - -
Spst2g01070 766 Gene3D Ribonuclease Inhibitor 92 370 IPR032675 -
Spst2g01070 766 ProSitePatterns Protein kinases ATP-binding region signature. 397 421 IPR017441 GO:0005524
Spst2g01070 766 PANTHER OS04G0122200 PROTEIN 368 686 - -
Spst2g01070 766 FunFam Leucine-rich receptor-like protein kinase family protein 256 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01070 Spst-Chr2 9433723 9439167 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01070 138 696 Receptor kinase-like Gene Family AT3G47570 36.677 1.57e-112 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst2g01070 Pkinase 8.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01070 - - gmx:102664380 572.778