Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01050 ATGGGAGCAGCTGGAGTTGGAGTGGGTGTGGGGGGTGACATATGGAAGGCCCATACGGCCATGGCGATGGTGCAGCTTTTCAATGGCATCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCGTCAACCAATTAGTCTTCTGTGTCTTTCGCGATGCCATTGCTCTTTCAATCCTCGCACCCCTTGCTTATATTCGTGAAAAAGATTCCTCCCTCTTAACCAGGCCTTTGGTTTCACCATTTATTTATTTATCGGTTCCACTTTTAAAAAAGTTGAGTATTGCGGATTCAATCGATAAGGGGAACTGGGCTTTTGAGTCTCTGAGTTATGTGTTAAGACAATATTTCTATGACCATTGGAGTGTTTGGATCGTAGGACGGATTCGACCACCCACTACTAAGAACCTCCTGGTTTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCATCTTATGCGGCTGCCATACAACCGGCCATTCCGGTCTTTACCTTTATGTTGGCTGTAATGATGGGTACAGAAAGAGTAAACCTAGCCAGATATGATGGTCTGGCAAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCCATATTAATGGTTTTGTATCGTGGTCCAGCTTTGATAGGACATGCTCCAATCGATCATGGTACACAAAATGAAATAAGTGCCAAAGGACAGCCAGAGCCAACTGGATGGTTAATTGGTGCTTTACAAGCTATCGGGTTTGACCGTTTTCATCTTGGGGTTCTGTGCTTGATTGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCAGCAAACATATCTGTCACAGCATATTCATACTTATTCGGAACTTTACTGATGGTCACGGTGTCATCATTCGTGAATACCGAGTCAAGTGACTGGAGTTTGGCATCATCAGAAGTACTTGCTGTTATTTATGCTGGAACTGTTGCATCTGCACTTAACTATGGACTCATTACATGGTGCAACAAAATCTTGGGGCCAGCCATGGTTTCCATTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTGTCACAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTTATCATTACTGGTCTATATTTGGTTACTTGGGCATCTTTTAAAGAAAAACAAGCAAATCTTGGAGGTGGAGTTGCTGCTCATGCCTCTTGGAAGGCTGAATCCTTCATGTGCTCATACCTTGGAAAGGGTTCTCGCAATGTTCAGAAAACTCCTGGTGGCCTCATCTTCCGCCAGAGATGGAACAACATGCAGTTTGTCACAAGTGCCTCATTTTTAGCCACTGTCTATTCTGACTACCTTGCTTCTTCTGGTAGAAACTTGAGATGTAATTCAGGAAATGTTGCTCCTGCTGAGCTTCTCTCCCTTGCAAAGTCTCAGGTAATTCCACCCCCTGCTTTCCCTTTCATAGTTTCACTTGGTTAG 1536 0.4342 MGAAGVGVGVGGDIWKAHTAMAMVQLFNGIYHVITKVALNVGVNQLVFCVFRDAIALSILAPLAYIREKDSSLLTRPLVSPFIYLSVPLLKKLSIADSIDKGNWAFESLSYVLRQYFYDHWSVWIVGRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPSYAAAIQPAIPVFTFMLAVMMGTERVNLARYDGLAKVGGTIICVSGAILMVLYRGPALIGHAPIDHGTQNEISAKGQPEPTGWLIGALQAIGFDRFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAYSYLFGTLLMVTVSSFVNTESSDWSLASSEVLAVIYAGTVASALNYGLITWCNKILGPAMVSIYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFKEKQANLGGGVAAHASWKAESFMCSYLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGRNLRCNSGNVAPAELLSLAKSQVIPPPAFPFIVSLG 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01050 511 Pfam Glycosyl hydrolase family 9 413 498 IPR001701 GO:0004553|GO:0005975
Spst2g01050 511 Gene3D - 397 499 IPR012341 GO:0005975
Spst2g01050 511 PANTHER WAT1-RELATED PROTEIN 19 407 IPR030184 GO:0016020|GO:0022857
Spst2g01050 511 SUPERFAMILY Multidrug resistance efflux transporter EmrE 128 217 - -
Spst2g01050 511 SUPERFAMILY Multidrug resistance efflux transporter EmrE 302 405 - -
Spst2g01050 511 Pfam EamA-like transporter family 263 400 IPR000620 GO:0016020
Spst2g01050 511 Pfam EamA-like transporter family 128 216 IPR000620 GO:0016020
Spst2g01050 511 SUPERFAMILY Six-hairpin glycosidases 412 497 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01050 Spst-Chr2 9201164 9206536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01050 158 420 Nodulin-like Gene Family AT5G45370 63.878 1.53e-118 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01050 - - gmx:100787738 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01050 2 9201164 9206536 Spst3g03605 3 86105771 86113038 PCT