Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01049 ATGGTGATTGCATCATCTTTCATGGTTAACGAGTCAACTGACTGGATTTTGAGGCAACCAGAGATACTAGCAGTTGCATATTCTGGAACTATTGCATCTGCTCTTAACTATGGAATCATTACATGGAGCAATAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTATAATCCGCTTCAACCTGCATTTTCTGCCTTCCTGTCCCAAATTTTCCTTGGCACTCCAATTTACTTGGGAAGCATCCTAGGGGGATCTTTGATCGTTGCTGGTCTCTATATAGTTACTTGGGCATCCTATAGAGAGAAACAAGAAACTTTTGTAGTTACTCCTAATGGCTCTTGGATCTCTGAACCACTTATTCATGAAAAAGGTGAATATCAGAATTCAGGATCCTCCAATTCACTATCAAAGCCAAGCTCATCAAATGAATGGTTGAATGACAATGTGCCAGAGTGGATTCATTCCAATGGGAGCAGCTGGAGTTGGAGTGGGTGTGGGGGTGACATATGGAAGGCCCATACGGCCATGGCGATGGTGCAGCTTTTCAATGGCATCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCGTCAACCAATTAGTCTTCTGTGTCTTTCGCGATGCCATTGCTCTTTCAATCCTCGCACCCCTTGCTTATATTCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTCCTGGTTTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCATCTTATGCGGCTGCCATACAACCGGCCATTCCGGTCTTTACCTTTATGTTGGCTGTAATGATGGGTACAGAAAGAGTAAACCTAGCCAGATATGATGGTCTGGCAAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCCATATTAATGGTTTTGTATCGTGGTCCAGCTTTGATAGGACATGCTCCAATCGATCATGGTACACAAAATGAAATAAGTGCCAAAGGACAGCCAGAGCCAACTGGATGGTTAATTGGTGCTTTACAAGCTATCGGGTTTGACCGTTTTCATCTTGGGGTTCTGTGCTTGATTGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCAGCAAACATATCTGTCACAGCATATTCATACTTATTCGGAACTTTACTGATGGTCACGGTGTCATCATTCGTGAATACCGAGTCAAGTGACTGGAGTTTGGCATCATCAGAAGTACTTGCTGTTATTTATGCTGGAACTGTTGCATCTGCACTTAACTATGGACTCATTACATGGTGCAACAAAATCTTGGGGCCAGCCATGGTTTCCATTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTGTCACAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTTATCATTACTGGTCTATATTTGGTTACTTGGGCATCTTTTAAAGAAAAACAAGCAAATCTTGGAGGTGGAGTTGCTGCTCATGCCTCTTGGGTCTCTGAACCACTTGTTCACGACAGAAGTCCACTCCAGAAAGGTCACCCATTTTCGGGGTCCTCCACCGCTTCCCCAAAAGCATTATCAGATTAA 1647 0.4317 MVIASSFMVNESTDWILRQPEILAVAYSGTIASALNYGIITWSNKILGPALVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSLIVAGLYIVTWASYREKQETFVVTPNGSWISEPLIHEKGEYQNSGSSNSLSKPSSSNEWLNDNVPEWIHSNGSSWSWSGCGGDIWKAHTAMAMVQLFNGIYHVITKVALNVGVNQLVFCVFRDAIALSILAPLAYIREKRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPSYAAAIQPAIPVFTFMLAVMMGTERVNLARYDGLAKVGGTIICVSGAILMVLYRGPALIGHAPIDHGTQNEISAKGQPEPTGWLIGALQAIGFDRFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAYSYLFGTLLMVTVSSFVNTESSDWSLASSEVLAVIYAGTVASALNYGLITWCNKILGPAMVSIYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFKEKQANLGGGVAAHASWVSEPLVHDRSPLQKGHPFSGSSTASPKALSD 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01049 548 SUPERFAMILY Multidrug resistance efflux transporter EmrE 207 313 - -
Spst2g01049 548 SUPERFAMILY Multidrug resistance efflux transporter EmrE 398 501 - -
Spst2g01049 548 MobiDBLite consensus disorder prediction 525 548 - -
Spst2g01049 548 MobiDBLite consensus disorder prediction 532 548 - -
Spst2g01049 548 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 99 - -
Spst2g01049 548 Pfam EamA-like transporter family 16 94 IPR000620 GO:0016020
Spst2g01049 548 Pfam EamA-like transporter family 176 312 IPR000620 GO:0016020
Spst2g01049 548 Pfam EamA-like transporter family 359 496 IPR000620 GO:0016020
Spst2g01049 548 PANTHER WAT1-RELATED PROTEIN 3 101 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01049 Spst-Chr2 9170260 9186990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01049 254 524 Nodulin-like Gene Family AT5G45370 62.637 9.81e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01049 - - gmx:100787738 635.565