Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01039 ATGGGTGGTTACTCCGCCGCCATCGCCGCCGTCACCACCATCCTCCTCCTGTTCCCGGCGCCGACTTCCCAAGCCCAGATTCTCAACACTGAAACCCACGTTTTCGGTCCCTTCAACCAATCCTACTTCAACACGTTCGCGGTGTTGCCCAATGCCGCCATTAATCTGGACGCTCTCCAAGTAACACCAGACAGCACCGGCAACGTGTCCCTCGCCAACCACTCCGGCAGAATCTTCTTCAACACCCCCTTCACTCTCTGGGACGACGACAATAACCTCGACGGAAAAATCGTCTCCTTCAACACTTCTTTTCTGATAAACGTGTACCGTCCCAAAAATGACACTCCCGGCGAGGGTATTGCCTTCCTCATCGCGCCTTCTCCCTCCAAGCCTCCTCTCAACAGTCACGGCGAGTTTCTCGGCCTCACGAACGCCTCCACGGACGGCAACCTCACCAACCAAATCCTCGCCGTCGAACTTGACACCGTGAGGCAGGACTTCGACCCCGATGACAACCACATCGGGCTGGACATTAACGGCGTCAGGTCCAACGTCACTACGCCTCTCACTCCCTTGGGCTTCGAGATCGTGCCCAACGTCACGCGCTTCCACGTGTTGTGGGTGGAGTATGACGGTGACCGGAAGGTTGTCGACGTGTTCATGGCGGTGCAGCCTGATAAGGACGCGCCCATAGTGGCGAAACCTGCTAAGCCCGTTTTGAGTTCATCTCTCGATCTGAAGCAAGTGGTAAACAGGGTTTCTTATTTTGGGTTCTCTGCTTCGACCGGTGACAACGTTGAACTAAACTGCGTTCTGAGGTGGAACATTTCTATTGAAGTTTTCCCCGAAAAAAATGGGATTGGAAATGCTTTGAAGATTGGGTTGGGTGTTGGAGTTCCTCTTGTGGTTCTTCTAGTGGCGGGTGTTGTAGGGTGGGTTTATTGGTTAAGTAGAAAGAATAGGGAAAGTGAGACCCAGATTTTGGGCACTCTCAAGAGTTTACCAGGAACTCCCAGAGAGTTTAGGTTTCAAGAATTGAAGAAAGCAACTAATAATTTCGATGAAAGGCATAAGCTTGGACAAGGTGGATACGGCGTCGTTTACAGAGGAACACTTCCGAAGGAGAAGTTGGAAGTAGCTGTGAAAATGTTTTCCAGAGATAAGATGAAAAGCACGGATGATTTCTTGGCTGAACTCACCATTATCAATCGTCTTCGTCACAAAAACCTCGTTCGCTTACTTGGGTGGTGTCATAGAAACGGGGTGTTGTTGTTGGTGTATGATTACATGCCTAATGGAAGTTTGGACAACCACATTTTCTGTGAGGAAGGGAGCAGCAATACCCCACTAAGTTGGTCTCTAAGGTACAAGATCATAACAGGGGTGGCTTCTGCATTGAACTACCTACACAATGAGTATGATCAGAAAGTGGTCCACAGAGACCTTAAGGCCAGCAACATCATGCTGGACTCAGACTTCAATGCTCGTTTAGGTGACTTCGGTTTGGCTCGTGCATTGGAGAATGGGAAAACATCATATGCAGAGTTGGAAGGAGTGCATGGCACCATGGGGTACATTGCCCCTGAGTGCTTCCACACGGGGAGGGCCACAAGGGAATCGGATGTTTACGGGTTTGGAGCAGTGCTCCTTGAGGTGGTGTGTGGCCAAAGGCCATGGACCAAGAATCAGGGGTATGAGTGCTTGGTGGATTGGGTATGGCTCCTGCATCGTGAGCAAAGGATACTTGATGCAGTAGATCCAAGACTTGAGCATGACTGTGTTGCTGAAGAGGCAGAGAGGGTTCTGAAACTAGGATTAGCATGCTCTCACCCAATTGCCAGTGAGAGACCAAAGATGCAAACAATTGTTCAGATCATATCTGGTTCAGTGCCTGTGCCTCATGTTCCACCTTTCAAGCCAGCTTTTGTGTGGCCAGCCATGGATCTATCAAGCCTTGCAAGTGAGCTCACACAAACCACAACCACTGAATACACACCCATGAACAGTAACACACATTCTATGCATGTTGATTTCTCAGATAGCGGTTCTCTCGTCTAA 2058 0.499 MGGYSAAIAAVTTILLLFPAPTSQAQILNTETHVFGPFNQSYFNTFAVLPNAAINLDALQVTPDSTGNVSLANHSGRIFFNTPFTLWDDDNNLDGKIVSFNTSFLINVYRPKNDTPGEGIAFLIAPSPSKPPLNSHGEFLGLTNASTDGNLTNQILAVELDTVRQDFDPDDNHIGLDINGVRSNVTTPLTPLGFEIVPNVTRFHVLWVEYDGDRKVVDVFMAVQPDKDAPIVAKPAKPVLSSSLDLKQVVNRVSYFGFSASTGDNVELNCVLRWNISIEVFPEKNGIGNALKIGLGVGVPLVVLLVAGVVGWVYWLSRKNRESETQILGTLKSLPGTPREFRFQELKKATNNFDERHKLGQGGYGVVYRGTLPKEKLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFCEEGSSNTPLSWSLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENGKTSYAELEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKNQGYECLVDWVWLLHREQRILDAVDPRLEHDCVAEEAERVLKLGLACSHPIASERPKMQTIVQIISGSVPVPHVPPFKPAFVWPAMDLSSLASELTQTTTTEYTPMNSNTHSMHVDFSDSGSLV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01039 685 ProSiteProfiles Protein kinase domain profile. 353 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01039 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 282 IPR013320 -
Spst2g01039 685 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Spst2g01039 685 CDD STKc_IRAK 359 626 - -
Spst2g01039 685 PANTHER - 63 636 - -
Spst2g01039 685 Gene3D - 31 288 - -
Spst2g01039 685 MobiDBLite consensus disorder prediction 663 685 - -
Spst2g01039 685 Pfam Legume lectin domain 42 279 IPR001220 GO:0030246
Spst2g01039 685 FunFam Putative L-type lectin-domain containing receptor kinase S.5 29 290 - -
Spst2g01039 685 Gene3D Transferase(Phosphotransferase) domain 1 430 630 - -
Spst2g01039 685 Pfam Protein kinase domain 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01039 685 CDD lectin_legume_LecRK_Arcelin_ConA 38 275 IPR001220 GO:0030246
Spst2g01039 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Spst2g01039 685 SMART serkin_6 353 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01039 685 ProSitePatterns Legume lectins beta-chain signature. 156 162 IPR019825 -
Spst2g01039 685 FunFam probable L-type lectin-domain containing receptor kinase S.5 338 429 - -
Spst2g01039 685 SUPERFAMILY Protein kinase-like (PK-like) 335 658 IPR011009 -
Spst2g01039 685 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Spst2g01039 685 FunFam probable L-type lectin-domain containing receptor kinase S.5 430 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01039 Spst-Chr2 9087476 9090477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01039 61 638 Receptor kinase-like Gene Family AT2G37710 39.672 2.85e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst2g01039 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01039 - - gmx:100784558 1171.38