Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g01017 | ATGACGCGCATACTCAGAATTCTCAAGTCCGCGGACAACGCCAAGGCGGTGACTACGGCGGCGCCGCCGCCGGAGGCGGTCGCCCTTGAGTCCGATTTCGTCGTGATTCTGGCGGCTCTCCTGTGCGCTTTAATCTGCGTGGTGGGACTCGTGGCAGTGGCGCGGTGCGCATGGCTCCGGCGAGGGCCCGGCGGCGGGAACTCGCCGCGGCAGGCTTTGGCGAACAAGGGCCTGAAGAAGAAGGTGCTGCAGTCGCTGCCGAAGTTCGCTTACGTGGACAGCAACCCGAGCAAGTGGGTGGCGACGTCGGAATGCGCGATTTGTCTGGCGGAGTTCACCGCCGGCGATGAGATCCGCGTGCTGCCGCAGTGCGGCCACGGCTTCCACGTGCCCTGCATCGACACCTGGCTAGGATCCCACTCCTCCTGCCCTTCATGCCGCCAGGTCCTCGCCGTCGCCAGGTGTCAGAAGTGCGGCCGCTTTCCGGCCACACCCGCCGGAGCCTCCAGAACCTCAGGAACCGAACCCGAATTGAAGTCCGGAGAAGACAACAATGCCGCTTCTATCAGTAATTGCAGCAATAACAACAGTGATGGCGGTGGAAGTGGAAATCACGTGAATCATCATCACGGCCACCATGTGAACAATGGGTTCTTGCCCTGA | 663 | 0.6229 | MTRILRILKSADNAKAVTTAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGPGGGNSPRQALANKGLKKKVLQSLPKFAYVDSNPSKWVATSECAICLAEFTAGDEIRVLPQCGHGFHVPCIDTWLGSHSSCPSCRQVLAVARCQKCGRFPATPAGASRTSGTEPELKSGEDNNAASISNCSNNNSDGGGSGNHVNHHHGHHVNNGFLP | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g01017 | 220 | CDD | RING-H2_EL5-like | 104 | 147 | - | - | |
Spst2g01017 | 220 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 24 | 159 | - | - | |
Spst2g01017 | 220 | FunFam | E3 ubiquitin-protein ligase ATL6 | 67 | 153 | - | - | |
Spst2g01017 | 220 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 152 | IPR013083 | - | |
Spst2g01017 | 220 | SMART | FANCL_C_2 | 101 | 155 | - | - | |
Spst2g01017 | 220 | SUPERFAMILY | RING/U-box | 84 | 152 | - | - | |
Spst2g01017 | 220 | SMART | ring_2 | 105 | 146 | IPR001841 | - | |
Spst2g01017 | 220 | MobiDBLite | consensus disorder prediction | 167 | 203 | - | - | |
Spst2g01017 | 220 | Pfam | Ring finger domain | 104 | 147 | IPR001841 | - | |
Spst2g01017 | 220 | MobiDBLite | consensus disorder prediction | 164 | 220 | - | - | |
Spst2g01017 | 220 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 147 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g01017 | Spst-Chr2 | 8830017 | 8830679 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g01017 | 28 | 184 | C3H Transcription Factor Family | AT1G20823 | 61.310 | 1.90e-62 | 191 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g01017 | - | - | gmx:100787383 | 333.954 |