Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01012 ATGAAATTTTCTGTTTCAGGCTACCCGTTCTCCCTAATTCTTTCCCTTTTCCTATTCGTCTTCTTCTTCTTCTTCTTCCTTGGCTTTTCCACCTCACAATCCCAACTCTCTCTTCTCTATTCTGCACCATCAGTTAAACCGGCCACCGCACTCGTCGCTGCCCTCGATGGCACCATGTATTTGGTGGACAGTGATTCTGGAAGGGTCATTTGGTCTTTTTCAACTGGATCTCCAATCTACTATTCCTATCATGCTCCCCTCAAGAACCCTAACCACAACTTCACCGGTTTCGTTGAATGCGGAGATGATTGGGAATTAATCGTCAATGATCCTCACTTGGGTAAAACGAGACTATCGAAATCAATTGAAGAGTATGTTGCCAGTACCCCTATCAAGACCAAGGATGGAGCATCTGTCTTTGGACACAAGAGAACCACTATGTATGTAGTTGATGCTAAAACTGGAGGGCTTTTCCGAAGCTACTCTGAACATGATCATGCTTCTAATTTAGTGTCGAGTTATGATGACGGGCTGCAGGTTGCAAGTACAAAGAATAATGAGCTTGTGGATCCTGTACAGTTGAATCCACCTGAGTTCTTGCTTGAGATAACTAGGACGGATTATACTTTGCAATCTGTTGTTCCTGGTTCTGGAATAGTTTTGTGGACTTTGAAAGTGGCTGAATTTAAGGCGGCACTGGTTTGCCAGCGTATTGAAAATCCTTCTGGAAGGACTTCATTTGATGCTGAAGATGGGTTTGTTTTGGACAGTGGCTTAGATTTTGCTATGCCTTATGGATGTTGGGACATGAAACTGAATGACGTATACCGCCAACGTAAGAGTTTTTTGATAGAGCCTGCTGACCCTGAAAGATTGTCCGAGGTTTATGAACAGATTGATATGCTTCCATTTGATACTTCAGAGCTCATGCTTCCATCACAACCTGCTACTGATAAGTTAGCCCATGGCCCGGATGAAAATACGATACTATCTTTGCCTATGCCAAATACTTTACCCTCTTTGCAACAAAAAATGGACTCATATGAGAGCAATGATAATGTACCAATGCTCCCCCGTTCTCTTATGGAGATCACTACACAAGAGGAAGTAGATTCAGGCAGGGTGAATAAATGGGCAACAACATTACCTCTTGTGTTATTTACCATCTCTCTTGGTTTTTTTATTATCTATCACTCTCTAGTCTTTACAACTAAAGACCAAAACAAGGAGATCAATTCAAAAAGTTCACCTCCTAAGAAGAAGAAAGCTCGCAAGTCAATAAAGAACAACATCATTGCTGTCACACAGGATAAACAATCTTTGGTCCAGGAGGACACACTCGCACTTAATGAAACAAATTCTAGCGCACAGGTGCAAGTTGATGGACGCAGGATTGGTAAACTATTTGTATCAAATAAAGAAATTGCTAAGGGAAGCAATGGTACTGTTGTCCTTGAGGGGACATATGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTCCAAAGTCATCATGATGTAGCTCATAAAGAAATCCAAAATCTCATTGTATCTGACAGACATCCAAACATTGTCCGATGGTATGGGGTGGAATACGATCATGATTTTGTTTACCTTGCTCTGGAACGCTGTACGTGCAACTTGGACGATTTGATTCATATGTACTCTGATATATCAGAAAATCCAGCAATTAAAACTTATCAAATGCAGACAGAGAAGAATGCTATGGACTGTCTTTGGAAATCTAATGGTTTTCCTTCACCTCTGTTACTGAAACTGATGAGGGATGTAGTTTCTGGGCTTGTTCATTTGCATGAACTAGGGATAATCCATCGGGATTTGAAACCTCAAAATGTTTTGATAATAGAAGAAAGATCATTATGTGCAAAGCTTTCTGACATGGGAATTAGCAAACGCCTTCTCGAAGATATGACTTCTCTAGGTCACAGTGTAACAGGCTGTGGCAGTTCAGGCTGGCAAGCACCAGAGCAACTTGTTCAAGGGCGTCAAACTAGAGCTGTGGATTTATTTAGTTTAGGTTGTGTCCTCTTTTTCTGCATGACTGCAGGAAGACATCCATTTGGAGAGCGTCTTGAGCGAGATGTCAATATTGTGAAAAATCAAAAGGATCTTTTCTTAGTGGAGTTTATTCCGGAAGCTGAGGATCTGATTTCTTGTTTGTTAAACCCGAATCCTGATCTTAGGCCAATGGCGACTGAAGTATTGCAACATCCTTTATTTTGGAGCTCTGAGATGAGACTTTCCTTTTTTCGTGATGTAAGTGATAGGGTAGAACTTGAAGATAGAGAATCTGATTCTGATCTTTTGAAGGCTCTAGAAAGCATTGCTCCACTGGCTTTAGGTGCAAAATGGGATGAGAAACTAGATCCTGATTTCATCACTAACATTGGTCGTTACCGGAGATATAAATTTGACAGTGTTCGAGACTTGTTGAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAATTGCCTCAAGAAATCCAGGAACTGATAGGACCTGTTCCGGATGGATTCAATGACTACTTTGCAAGTCGATTCCCAAGACTCTTGATTGAAGTGTACAATGTTGTATACAGAAATTGCAAGGACGATGAATGTTTCCAAAGATACTTTAGATACATTAACTAG 2649 0.4096 MKFSVSGYPFSLILSLFLFVFFFFFFLGFSTSQSQLSLLYSAPSVKPATALVAALDGTMYLVDSDSGRVIWSFSTGSPIYYSYHAPLKNPNHNFTGFVECGDDWELIVNDPHLGKTRLSKSIEEYVASTPIKTKDGASVFGHKRTTMYVVDAKTGGLFRSYSEHDHASNLVSSYDDGLQVASTKNNELVDPVQLNPPEFLLEITRTDYTLQSVVPGSGIVLWTLKVAEFKAALVCQRIENPSGRTSFDAEDGFVLDSGLDFAMPYGCWDMKLNDVYRQRKSFLIEPADPERLSEVYEQIDMLPFDTSELMLPSQPATDKLAHGPDENTILSLPMPNTLPSLQQKMDSYESNDNVPMLPRSLMEITTQEEVDSGRVNKWATTLPLVLFTISLGFFIIYHSLVFTTKDQNKEINSKSSPPKKKKARKSIKNNIIAVTQDKQSLVQEDTLALNETNSSAQVQVDGRRIGKLFVSNKEIAKGSNGTVVLEGTYEGRTVAVKRLVQSHHDVAHKEIQNLIVSDRHPNIVRWYGVEYDHDFVYLALERCTCNLDDLIHMYSDISENPAIKTYQMQTEKNAMDCLWKSNGFPSPLLLKLMRDVVSGLVHLHELGIIHRDLKPQNVLIIEERSLCAKLSDMGISKRLLEDMTSLGHSVTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVEFIPEAEDLISCLLNPNPDLRPMATEVLQHPLFWSSEMRLSFFRDVSDRVELEDRESDSDLLKALESIAPLALGAKWDEKLDPDFITNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPDGFNDYFASRFPRLLIEVYNVVYRNCKDDECFQRYFRYIN 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01012 882 SMART ire1_9 43 74 IPR018391 -
Spst2g01012 882 SMART ire1_9 130 162 IPR018391 -
Spst2g01012 882 Gene3D Phosphorylase Kinase; domain 1 454 541 - -
Spst2g01012 882 SMART PGNneu 811 865 - -
Spst2g01012 882 ProSiteProfiles Protein kinase domain profile. 469 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01012 882 Gene3D - 29 270 IPR015943 GO:0005515
Spst2g01012 882 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 570 748 - -
Spst2g01012 882 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 461 541 - -
Spst2g01012 882 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 750 882 - -
Spst2g01012 882 SMART serkin_6 469 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01012 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Spst2g01012 882 PANTHER IRE1-RELATED 117 879 IPR045133 GO:0004521|GO:0004674|GO:0030968
Spst2g01012 882 Pfam Ribonuclease 2-5A 752 878 IPR010513 GO:0004540|GO:0006397
Spst2g01012 882 FunFam Inositol requiring 1-1 31 242 - -
Spst2g01012 882 Gene3D Transferase(Phosphotransferase) domain 1 568 748 - -
Spst2g01012 882 SUPERFAMILY Protein kinase-like (PK-like) 462 757 IPR011009 -
Spst2g01012 882 Pfam Protein kinase domain 471 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01012 882 ProSiteProfiles KEN domain profile. 749 880 IPR010513 GO:0004540|GO:0006397
Spst2g01012 882 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 39 187 IPR011047 -
Spst2g01012 882 Gene3D KEN domain 749 881 IPR038357 -
Spst2g01012 882 CDD RNase_Ire1 750 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01012 Spst-Chr2 8759014 8769643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01012 495 745 MAP Kinase Kinase Kinase AT3G06030 28.235 8.71e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Spst2g01012 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01012 K08852 - gmx:100785363 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01012 2 8759014 8769643 Spst2g01012 2 8759014 8769643 ECH
Spst2g01012 2 8759014 8769643 Spst3g03709 3 87135712 87145379 PCT