Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01011 ATGTCCTGTTCTGGAATCAGACCTGACCCACTCCCGGTGGAGAGGAGTAAAACTGGGGATATTGCTTCACTTGTTTGTGGAGGAAGTTGTTCAGTAGTGGCTATTGTTTTACAGGCCCCTCGTCCAACCATGATTAAAGTTTGGCCCTTGGTTTTAATGGTTCTCTCCATTGGATTTTTTCCAAATGGGGATGGGAGACGAAATACCACAATACCAGATTTTGTAAATATTGGGGCTCTCTTCTCTTTCAATACCAGTGTTGGTAGAACTATAAAAATTGCTTTAGAAGCTGCGGTTGAAGATGTAAATTCTGATCCAACTATTCTTGGTAGAACCAAGCTGAACCTCTCACTGCAAGAAGATTCTAAGTATAGAGGTTTCCTGAGCATTTCTGAGGGTATGTCTTTCATAGTATCCACCTTGTTATGTGTCATGGCAAGACAGACGGTGGCAATAATAGGCCCCCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTCCAAGTTCCTCTTCTGTCATTTTCAGCTCTGGACCCTACTCTTTCTTCACTTCAATTCCCATTCTTCATTAGAACTTGTCATAGTGATCTTTATCAAATGGCTGCAATAGCAGACCTTGTTGACCACTATGGTTGGAAAGATGTTATCGCTGTGTACCCTGATGATGATAATGGGAGAAATGGAATTAGCGCATTAGGTGATAAGCTTGCGGAGAGGCGTTGCAAGATATCATATAAAGCACCTTTGAGCCCCCAAGCATCTATGGAAGAGATTAGTGATGTGCTTGTTCAGGTGGCTCTGGCAGAATCACGGGTAATAGTTGTTCATGCCAATACTCTATTTGGCCCCAAGGTCTTTACAGTTGCAAAGAATCTGGGGATGATGGGAACTGGTTATGTCTGGATAGCCACTGCTTTCCTCTCTGCCCTGCTTGATATCAATTATCCCCTCTCTTCCGATTCAATGGATGAAATTCAAGGAGTTCTTACAGCACGTATCTACACGCCAGATTCAGAGAGCAGAAGAACTTTTGTTTCCAGGTGGAAAAACTTGACTAGTGGAAATACTGCTAATGTCAATCTTGGATTGAGTTTCTTACCTCTCTATGCATATGACACTGTTTATGTGCTTGCTCGTGCTCTTGATGCATTTTTTAAAGAAGGTAACCAAATTACATTCTCAATTGATTCAAAGCTATCTAGCTTACATGAAGACAAGTTGAATCTTGAGGCCTTGAAAATTTTTAATGAAGGACATTTGTTACGTAGTAACATCTATGAGGTAAACATGACTGGTGTATCAGGTCCATTCAGGTATACATCTGATAGAAACCTTGTTAATCCTGCATATGAAATCATTAATGTGGTTGGAACAGGAACTCGGAGGATCGGTTATTGGTCTAATTACTCTGGTTTATCAGTTGTTCCTCCAGAAACTCTCTATTCCAAACCAGTCAATCTTTCGAGGGAAAATCAAAAGCTCTTCCCTGTGATTTGGCCTGGAAACACTGATGAGAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAAGATTGGAGTACCAAGAGGTGTTAGTTACCAAGAATTTGTCTCACCAATAAAAGGCACTGACATGTTTCAGGGATTCTGCATTGATGTATTTGTTGCTGCGGTGAACCTGTTGCCTTATGCTGTCCCCTATAAGTTCATCTCATACGGGGATGGTAAGAACAATCCTAGTATGACTGAGCTTGTCCGTCTGATCACAACGAGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAACGAACAAGGATGGTCGATTTTACTCAGCCATATGTTGAGTCTGGTCTAGTGGTGGTAGCGCCCGTTAGGAGGGCAGAATCCAATGCTTTGGCCTTTCTGGCCCCTTTTACACCAAGGATGTGGTGTGTCACAGCTGTCTTTTTCATATTAGTGGGAGCTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGGGGACCACCCAAAAAACAAGTAGTTACTATTTTATGGTTTAGTTTTTCAACAATGTTCTTTTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGTGTTGTGTTGATTATATGGTTATTTGTAGTCCTTATAATTAACTCAAGTTACACGGCAAGTCTAACCTCAATCCTCACAGTGCAACAGCTTTATTCTCCCATTAAAGGCATTGAAAGTCTAGTACATAGCAAAGAGCCTATTGGGTACACGCAGGGTTCTTTCGCGAAAGACTATTTAGTTCAGGAAATTGGTATTGAGGAGTCCAGGCTTGTTCCTCTGACAACACCAGAAGAAGCTGCTAAAGCACTGAAAAATGGTCCCCAAAATGGAGGTGTTGCTGCTTACATCGATGAGCGTGCCTACACTGACATCTTCCTCTCCAGCCGTTGTAATTTAACTGTCGTAGGTCAGGAGTTCACCAGAAATGGTTGGGGATTTGCTTTTCCACGGGACTCGCCATTAGCAGTTGACCTGTCAACTACCATATTGCAAATGATAGATAATGGAGATTTACAAAGGATCCATGATAAATGGCTTTTGAGTAGTGCTTGCTTATCACAAGGTGCAAAGCTTGAAGTGGAAAGACTCCAACTTAAAAGCTTTTGGGGCCTCTATGCAATCTGTGGACTTGCGTGCTTGCTTGCACTCTTCATCTATCTTATACAGATTTGGAGGCAATACCACAAGCACTACTTAGAGGAACATGAGTCCACTGATGGCCAAAGCTTAAGATCAAGATCTTCACGTCTCAAGACTTTCCTTTCATTTGCAGATGAAAAAGAAGAAACTGTTAGGAGCCGGTCGAAGAGAAGGAAAATGGAGAGGATCTCATACAGAAGCAGTGAAGGAAGCCTATCCATCACCTCCAATAAGGAATATGCTTCACGCAGAAATGAATGTGCCAGTGAAGTATAA 2967 0.4189 MSCSGIRPDPLPVERSKTGDIASLVCGGSCSVVAIVLQAPRPTMIKVWPLVLMVLSIGFFPNGDGRRNTTIPDFVNIGALFSFNTSVGRTIKIALEAAVEDVNSDPTILGRTKLNLSLQEDSKYRGFLSISEGMSFIVSTLLCVMARQTVAIIGPHSSVTAHVITHIANELQVPLLSFSALDPTLSSLQFPFFIRTCHSDLYQMAAIADLVDHYGWKDVIAVYPDDDNGRNGISALGDKLAERRCKISYKAPLSPQASMEEISDVLVQVALAESRVIVVHANTLFGPKVFTVAKNLGMMGTGYVWIATAFLSALLDINYPLSSDSMDEIQGVLTARIYTPDSESRRTFVSRWKNLTSGNTANVNLGLSFLPLYAYDTVYVLARALDAFFKEGNQITFSIDSKLSSLHEDKLNLEALKIFNEGHLLRSNIYEVNMTGVSGPFRYTSDRNLVNPAYEIINVVGTGTRRIGYWSNYSGLSVVPPETLYSKPVNLSRENQKLFPVIWPGNTDEKPRGWVFPNNGRLLKIGVPRGVSYQEFVSPIKGTDMFQGFCIDVFVAAVNLLPYAVPYKFISYGDGKNNPSMTELVRLITTSEFDGAVGDIAITTERTRMVDFTQPYVESGLVVVAPVRRAESNALAFLAPFTPRMWCVTAVFFILVGAVVWILEHRVNDEFRGPPKKQVVTILWFSFSTMFFSHRENTVSTLGRVVLIIWLFVVLIINSSYTASLTSILTVQQLYSPIKGIESLVHSKEPIGYTQGSFAKDYLVQEIGIEESRLVPLTTPEEAAKALKNGPQNGGVAAYIDERAYTDIFLSSRCNLTVVGQEFTRNGWGFAFPRDSPLAVDLSTTILQMIDNGDLQRIHDKWLLSSACLSQGAKLEVERLQLKSFWGLYAICGLACLLALFIYLIQIWRQYHKHYLEEHESTDGQSLRSRSSRLKTFLSFADEKEETVRSRSKRRKMERISYRSSEGSLSITSNKEYASRRNECASEV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01011 988 SUPERFAMILY Periplasmic binding protein-like I 72 515 IPR028082 -
Spst2g01011 988 CDD GluR_Plant 523 863 - -
Spst2g01011 988 FunFam Glutamate receptor 760 867 - -
Spst2g01011 988 Pfam Ligand-gated ion channel 864 896 IPR001320 GO:0015276|GO:0016020
Spst2g01011 988 SUPERFAMILY Periplasmic binding protein-like II 500 865 - -
Spst2g01011 988 FunFam Glutamate receptor 634 764 - -
Spst2g01011 988 Gene3D - 634 759 - -
Spst2g01011 988 MobiDBLite consensus disorder prediction 949 988 - -
Spst2g01011 988 Gene3D - 93 451 - -
Spst2g01011 988 FunFam Glutamate receptor 518 634 - -
Spst2g01011 988 Pfam Receptor family ligand binding region 93 461 IPR001828 -
Spst2g01011 988 Gene3D - 517 633 - -
Spst2g01011 988 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 75 934 IPR015683 -
Spst2g01011 988 SMART GluR_14 524 865 IPR001320 GO:0015276|GO:0016020
Spst2g01011 988 PIRSF IGluLR_plant 43 987 IPR017103 -
Spst2g01011 988 PRINTS Metabotropic glutamate GPCR signature 203 219 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst2g01011 988 PRINTS Metabotropic glutamate GPCR signature 184 203 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst2g01011 988 PRINTS Metabotropic glutamate GPCR signature 103 122 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst2g01011 988 PRINTS Metabotropic glutamate GPCR signature 219 236 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst2g01011 988 PRINTS Metabotropic glutamate GPCR signature 152 178 IPR000337 GO:0004930|GO:0007186|GO:0016020
Spst2g01011 988 CDD PBP1_GABAb_receptor_plant 76 480 IPR044440 -
Spst2g01011 988 MobiDBLite consensus disorder prediction 963 979 - -
Spst2g01011 988 Gene3D - 811 870 - -
Spst2g01011 988 Pfam Bacterial extracellular solute-binding proteins, family 3 546 863 IPR001638 -
Spst2g01011 988 FunFam Glutamate receptor 199 355 - -
Spst2g01011 988 Gene3D - 199 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01011 Spst-Chr2 8752811 8757818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01011 48 965 Ion Channels AT3G51480 56.725 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01011 K05387 - gmx:100793320 1665.2