Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01010 ATGTCAGTTCCTTTCAAGCGCTACAATGGCGACCGCAAAACTTGCATTTGCCAATCACTTTATATATACTCTTCTCAACGGTTCCCCCTTCTCATATCCATTTATATCTGTAGTGGTCTTCGTTTTTCTGCTCTTAATCTTCTCTCTTTGCCACCACCATTTCTTCCTTTCTCTGCACGCGACCACCTATCTCTTGTGTTTCTCACGGTTGCCTTCGCTAGATGTGGGTGTTGTTTGAACAGTTTTGGAGAAGCTTCTGATACAATGAGTGGTGGTGTTGGTGGTGGGTGCCCCTGCCCCAGGGGTAGTAGTGATGGTTCCATGGAGGATCCCAATGGCGATACGGTGGGTACTTTGAATCAGAATGCAGGGAAGCCTCCGAGGGACCATTCGGTTATGCGACATTTCAGCAGCTCTTCTTGGTCTGCTGAACCGGAATCAAATATTAATATTATTGGACTTAAATCAAGCCCAGAACAAAAATCAGACCTTTCACTTGTAATGCGATCTGGAAGCTATTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAATTCATATGCATTGATTTTCTTAGTGAATGTGACGGTCTAGGAGCAAACCTTCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGTGGTGTTGACGCGGCATCATTTACGAGAAAGAACATTCTCAAGTTTATAGTTAAAGATGCCCATTTCCCATCTGGCATTAAGAAAGCAATTAAGAGTGCATTTGTGAAGGCTGATCTTGCTTTTAGAGATTCCAGTGCTCTTGATAGTTCTTCAGGCACCACCGCTCTAATAGCCCTTATGTTGGGAAGTTCCATGCTGATTGCTAATGCAGGAGATTCGCGTGCTGTATTGGGGAAACGGGGCAGAGCTGTTGAACTTTCCAAAGACCATAAACCAAACTGCACATCTGAAAGATTAAGAATTGAAAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATAAAAGGTAGTAAAGGTTCCAAGAGTCCTTTAAGCTCCGAGCCGGAGGTAGAGGATATTGTTCTGACCGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGCAGCCAGTGTGCTGTGACAATGGTGAGGAAGGAGCTCATGCAGCATAATGATCCCACCAAATGTGCAAAAGTACTTGTTGCTGAAGCCCTCCAACGCAACACATGTGACAACCTCACAGTTGTGGTTGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 1392 0.4425 MSVPFKRYNGDRKTCICQSLYIYSSQRFPLLISIYICSGLRFSALNLLSLPPPFLPFSARDHLSLVFLTVAFARCGCCLNSFGEASDTMSGGVGGGCPCPRGSSDGSMEDPNGDTVGTLNQNAGKPPRDHSVMRHFSSSSWSAEPESNINIIGLKSSPEQKSDLSLVMRSGSYSDKGPKQYMEDEFICIDFLSECDGLGANLPSPAAFYGVFDGHGGVDAASFTRKNILKFIVKDAHFPSGIKKAIKSAFVKADLAFRDSSALDSSSGTTALIALMLGSSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPEVEDIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPTKCAKVLVAEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01010 463 CDD PP2Cc 168 429 IPR001932 -
Spst2g01010 463 PANTHER PROTEIN PHOSPHATASE 2C 156 427 IPR015655 GO:0004722|GO:0006470
Spst2g01010 463 ProSitePatterns PPM-type phosphatase domain signature. 208 216 IPR000222 GO:0043169
Spst2g01010 463 SMART PP2C_SIG_2 192 429 IPR001932 -
Spst2g01010 463 MobiDBLite consensus disorder prediction 108 125 - -
Spst2g01010 463 ProSiteProfiles PPM-type phosphatase domain profile. 169 429 IPR001932 -
Spst2g01010 463 Gene3D - 154 433 IPR036457 -
Spst2g01010 463 FunFam Probable protein phosphatase 2C 22 155 432 - -
Spst2g01010 463 SMART PP2C_4 159 427 IPR001932 -
Spst2g01010 463 Pfam Protein phosphatase 2C 176 421 IPR001932 -
Spst2g01010 463 MobiDBLite consensus disorder prediction 103 141 - -
Spst2g01010 463 SUPERFAMILY PP2C-like 164 430 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01010 Spst-Chr2 8737684 8740261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01010 152 461 PP2C-type Phosphatase Gene Family AT3G51470 76.129 2.02e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01010 K14803 - gmx:100781874 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01010 2 8737684 8740261 Spst2g01010 2 8737684 8740261 ECH