Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01007 ATGGTGGGAACCGGATCCTCTACAGTGATGATGAGAATTTTTTTCAAAATTCTGAGACAGTGGAAGAAGGATCAGAAGGTGATGTCGTGTTCGTCGTCATCAGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTCAGAGTTGCCGATCAGTTCGGCGGCGGCAGGTACATAGCACAAAGGAAGTTGGGTTGGGGTCAGTTTTCCACCGTCTGGCTTGCTTACGATACTAAAACTTCTTCATTTGTTGCTCTCAAGATACAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCATGAGATTGATATTCTTTCATCCATTGCTGAACATGACCCATCAAATTCAAAATATGTAATTCAATTGATTGACAACTTTAAGCACACGGGTCCAAATGGGCAGCATCTTTGCATGGTCCTTGAGTTTCTTGGTGATAGCTTGCTTCGCTTGATCAAATATAGTCGTTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCGTTTTAATTGGTTTGGACTACTTACATACTGATCTTGGTATAATTCACTCTGACCTGAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCACCCCGATTCTAGAGCGGCCTGAGGGACACACAAATAGTGGAGTAACAAGTCTCATTGAGAAAAGATTGAAAAGGAGAGCAAGGTCGGCAGTTGCTAAGATATCTGGAAGAAGAACGTCGATGGGAGGAACAGGAGATGTTCGAAAGACTGATAGAAATATTCATGGGATCGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCGTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAGACAAGGCAGTACAGAGCACCTGAAGTTGTACTGATGTCTGGCTACTCTTTTCCTGTTGACATGTGGTCTTTTGCGTGCATTGCTTTTGAACTAGCCACTGGGGATATGTTGTTTACACCAAAGGGTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCTCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCTACTGTAGGAGCTCAATCCAAGGATTTCTTTGACAGGCACGGGGATCTAAAAAGAATTCGAAGGCTAAAATTTTGTCCACTAGACAAATTGCTGATTGATCGATATAAATTTTCAGTGAATGATGCTCAAGAGTTATCAGAATTTCTTCTACCTCTGTTTGATTTTGCGCCAGAGAAGCGACCAACTGCGCGACAATGCCTGCAACATCCATGGCTGAAGTGCATAGAGTCCCCTCCAAATGAAACTACTAGGAAAAATGTGGATGTTGGGATGAGCAACCTGAAAATCAGTGGGGGAAAGTGA 1407 0.4357 MVGTGSSTVMMRIFFKILRQWKKDQKVMSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFGGGRYIAQRKLGWGQFSTVWLAYDTKTSSFVALKIQKSAAQFVQAALHEIDILSSIAEHDPSNSKYVIQLIDNFKHTGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLPLNKVREICKCVLIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLTPILERPEGHTNSGVTSLIEKRLKRRARSAVAKISGRRTSMGGTGDVRKTDRNIHGIDVRCKIVDFGNACWADKQFAEEIQTRQYRAPEVVLMSGYSFPVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIATVGAQSKDFFDRHGDLKRIRRLKFCPLDKLLIDRYKFSVNDAQELSEFLLPLFDFAPEKRPTARQCLQHPWLKCIESPPNETTRKNVDVGMSNLKISGGK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01007 468 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
Spst2g01007 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Spst2g01007 468 Gene3D Transferase(Phosphotransferase) domain 1 119 440 - -
Spst2g01007 468 FunFam Protein kinase superfamily protein 51 150 - -
Spst2g01007 468 FunFam Serine/threonine-protein kinase SRPK 144 440 - -
Spst2g01007 468 SMART serkin_6 65 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01007 468 ProSiteProfiles Protein kinase domain profile. 65 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01007 468 CDD STKc_SRPK 54 440 - -
Spst2g01007 468 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Spst2g01007 468 SUPERFAMILY Protein kinase-like (PK-like) 61 448 IPR011009 -
Spst2g01007 468 Pfam Protein kinase domain 66 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01007 468 Pfam Protein kinase domain 279 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01007 468 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 25 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01007 Spst-Chr2 8708104 8715829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01007 31 468 EF-hand Containing Proteins AT5G22840 47.554 2.47e-164 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Spst2g01007 Pkinase 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01007 K08832 - gmx:100784192 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g01007 2 8708104 8715829 Spst2g01007 2 8708104 8715829 ECH
Spst2g01007 2 8708104 8715829 Spst3g03712 3 87164165 87167401 PCT