Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01002 ATGGCCAAGAAAGTACTTGCTCGGAAGAGACATCCTGGTGGCCTGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTACTGTCCAGAAGGAGAATTACCATGCAATTATCAGGTAGAAGAAGAAGAGGGCAGGCATGAGAAGAATCGTTATTCAAATGTGGGTTCAATGAAAAAACTGATTAATGAGGAGTTGTCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGGCCCATCAGATAAAAGAATAAGTGAAAACTTGGGGAAGAAGTCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAGCTTCAATTCTTCGACCAATATGGATTTTGAGTCTTGCTATGAAGACATAGATGTTGATGATGATGATGATGGATGGAACAAGAGTTTTGGAGAACCGAGGCCGCGGGGTCATCCTCAGGAGGAGGAACTCCAGAAGTTCAAGAAAGAGTTTGAGGCATATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATTGGAAGTGTTCCAAGACGATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGGTGATGCATAATGATTTGGTTTTACAAAGAACGACAGCAGGGAAACTTGCAGATCGTGAAAGCCACTCATTCAAAACACCACCACCTGAAAGTTCAGAATATGAAGGTAACATGATGGAGTTAGTCCCAGCAAGGAAAACCTTTCCTCCAAGGAGCAGAACACTAAGTAGAGATTTTGAAGAGTCCTTAATGATGAAATATTGCAACAGATTAGATACATCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGGATTGGACCATTTCAACAAGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAGATGTGAACTACAAGGGAAAACTGTCAAAAAGGGTTCTGTGGTTCGAGGGAGTGGTATTAAAACACCTTATAATGAAAACTCATCTGATCCTAAACTAATAGCCCGACATATAGTAAAGCAAGTCAGAGAAAGCGCGACTAGAGAGGCTGACGCAAATTTACTCTCCTCAGAATCAACAGGGTCATTCAAAAGCGAATTGCAGTTCAATGGACCAACTTCCCCAGAAATTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTAAGAAATGTTGTGGGAAGTGAAGCATATGCTGACGTTCCTGAGGGAAAACTAAGGTTACTTGCATTAGATAGACATAAAGCTGGAGTAAAGCAAGCGCGAGATAATATGAAGTATGCAAATAACTGGGAAATTTCCAAAGAGGACACAGAAATTCAAACAGGTTCTTTCAGGCATGAACTGGATGAGAATATATTTCTCCACAAGGAGTTGTCCCCCAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTCTGTCTGTTGATGTGAAGAAACGGAAAAAGGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGGTATAATCTTGCTTTCAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTGGAATCACATGGTAATGAATATGGTCCCATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTTATGAACTGTGGTCAGCGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGCGTCCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAACATCAACTCCTGATGTGTCTTCAAGAGATGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCGGGTTTGAATGAACTAAGGAGGCAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTCACTATGAAACAGGAGCCAGCCGAGTCTGACTTAGACCAATTAGAGGATCCAGCAGAATCTTACATACGAGATCTACTTGTTGCTTCCGGTCTGTACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCCACTCAGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATCTGTCAAGGAAAATGAGGAAAGCTGTATCAAGGATCAGAATGAGAATAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGATGTTGTCGAGATTCAGAAGGAAATCAAGTAACTCTTCCATGTTGCCACCATCTGGAAAGGAACTATTGAACTTAGTGTGGGACATCATCCGTGTTTCTATATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGAATTAATAAATGATGAGATCAATATTTTGGACAGAGATATAGAATGTCTAATAACTGATGACCTGGTTGGAGAACTCACAAAGGATATATGCTCTAAGAAGAAGTGA 2643 0.4173 MAKKVLARKRHPGGLEAPRNSLDLQVQTPQNYCPEGELPCNYQVEEEEGRHEKNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVGPSDKRISENLGKKSSEKGVSRRGSVSWGSSSFNSSTNMDFESCYEDIDVDDDDDGWNKSFGEPRPRGHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSVPRRLLAQENLNKEKVMHNDLVLQRTTAGKLADRESHSFKTPPPESSEYEGNMMELVPARKTFPPRSRTLSRDFEESLMMKYCNRLDTSSPTRIVILKPGPDSICNHEEDWTISTRTIQGRNSIEDFLEEVKERLRCELQGKTVKKGSVVRGSGIKTPYNENSSDPKLIARHIVKQVRESATREADANLLSSESTGSFKSELQFNGPTSPEIISRDTRKFLSDRLRNVVGSEAYADVPEGKLRLLALDRHKAGVKQARDNMKYANNWEISKEDTEIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETLSVDVKKRKKDRFNIKERVSNFRYNLAFRGRLFGRRVQSMVESHGNEYGPMVRDVTSGPTVLMNCGQRHENSTEVPPSPASVCSSVHEDFWRRTEYLSPTSTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESDGPEDFTMKQEPAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGHSVYEEVEESHKKSVKENEESCIKDQNENKLDHKVLLDLLNEALSVVLGPPLMLSRFRRKSSNSSMLPPSGKELLNLVWDIIRVSIYPPSDISTYSLDTLVAQHLGSIPWSELINDEINILDRDIECLITDDLVGELTKDICSKKK 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01002 880 MobiDBLite consensus disorder prediction 1 21 - -
Spst2g01002 880 Pfam Domain of unknown function (DUF4378) 703 870 IPR025486 -
Spst2g01002 880 Coils Coil 658 678 - -
Spst2g01002 880 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 876 - -
Spst2g01002 880 Pfam DUF761-associated sequence motif 76 94 IPR032795 -
Spst2g01002 880 MobiDBLite consensus disorder prediction 101 134 - -
Spst2g01002 880 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01002 Spst-Chr2 8638463 8642542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01002 62 875 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.336 3.33e-149 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01002 - - gmx:100779720 1431.39