Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00996 ATGGGTGTCTGTTTCACTTCCCTCGCTCGCCACCAATCACCCCACTCTACATCCCCTCATTTAGGTTCAGCAACAGTATCCTTGGAGACCGAGGAAGGAAAGCATGAAGCTTCAGAGTTGTCAGAGGTTGGTGAAAGCACTTGTAATAGTAACAGCAATAGCATTGTTTTTCCGAGTGTGGAAATGAGGACCTTGAAGGAGTTTAATTTCGCGGAGCTGAAAGCAGCAACCAAGAGTTTCAAGTCTGATGCATTGCTTGGAGAAGGAGGTTTCGGGAAGGATGGGCCTTCAAGAGTGGCAGGAACAGTTTCTCACCCAAACTTGGTCAAGCTTTTGGGTTACTGTTGTGAGGATATGGAATTTCTCCTAGTGTACGAATTCATGCCGAAGGGAAGCTTGGAGAATCATCTATTTTGGAGAAATAATAATAACACACAAGCATTGTCTTGGGACACTCGACTCAAAATAGCCATTGGTGCAGCTCGGGGCTTGGCTTACTTGCACACTTCAGAGAAGCAAATCATATACAGAGATTTCAAAGCCTCCAATATTCTACTTGACGAGGAGTACAACGCAAAAATATCAGATTTTGGTTTGGCCAAATTAGGCCCTTCTGCGGGAGATTCACACGTGACTACCAGGATCATAGGAACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGCCACCTTTATGTGAAAAGTGATGTTTATGGATTTGGTGTTGTGCTGCTTGAAATGCTGAAAGGGATGCGGGCACTTGATACAAACCGCCCTCCAGGGCACCAGAATCTGGTTGAATGGATTAAGCCTTTTCTCTCTGATAAAACCAAGTTGAAAAGTGATATCATGGATGAGAGGATTGAGGGTCAGTATTCAACCATGGCAGCACTGAAAGCAGCACAGCTTACTCTAAAATGCCTTGAATCTGACCCTAAGAAACGTCCTTCTATGAAAGAAGTTCTTGACACATTGGAAACCATCCAAACAATCAATGTTAGAAGGAGGGAAAAAAAGAAACATATTTCCAAGTTTGCAACTACGAACAGTTTCCAATAG 1062 0.435 MGVCFTSLARHQSPHSTSPHLGSATVSLETEEGKHEASELSEVGESTCNSNSNSIVFPSVEMRTLKEFNFAELKAATKSFKSDALLGEGGFGKDGPSRVAGTVSHPNLVKLLGYCCEDMEFLLVYEFMPKGSLENHLFWRNNNNTQALSWDTRLKIAIGAARGLAYLHTSEKQIIYRDFKASNILLDEEYNAKISDFGLAKLGPSAGDSHVTTRIIGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLKGMRALDTNRPPGHQNLVEWIKPFLSDKTKLKSDIMDERIEGQYSTMAALKAAQLTLKCLESDPKKRPSMKEVLDTLETIQTINVRRREKKKHISKFATTNSFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00996 353 PANTHER OS01G0588500 PROTEIN-RELATED 100 330 - -
Spst2g00996 353 SUPERFAMILY Protein kinase-like (PK-like) 66 330 IPR011009 -
Spst2g00996 353 MobiDBLite consensus disorder prediction 9 25 - -
Spst2g00996 353 Gene3D Transferase(Phosphotransferase) domain 1 128 351 - -
Spst2g00996 353 Gene3D Phosphorylase Kinase; domain 1 97 127 - -
Spst2g00996 353 MobiDBLite consensus disorder prediction 8 50 - -
Spst2g00996 353 ProSiteProfiles Protein kinase domain profile. 37 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00996 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Spst2g00996 353 Pfam Protein kinase domain 101 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00996 353 FunFam Serine/threonine-protein kinase PBS1 128 345 - -
Spst2g00996 353 Gene3D Phosphorylase Kinase; domain 1 50 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00996 Spst-Chr2 8569690 8573198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00996 43 326 Glycoside Hydrolase AT3G07070 41.720 2.72e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g00996 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00996 - - gmx:100778116 502.671