Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00995 ATGGGTCTCTGCTTTGCTTCTCTCTCTCCCCACCAAACTCCCTCTGAATCTCTTCACTATTCTGGTTCAGGGCGAGAAGGCACTGGCGTTAATGGAGGAAGCAGTAGCAGTGGCAGTAGCAATAACGTTGTGTTTCCGAGTATGGAAACGAGGAACCTGAAGCAGTTCAGTTTTGTGGATCTGAAAGCAGCAACCAGGAGTTTCAGGTCTGATGCATTGCTTGGAGAAGGGGGTTTTGGGAAAGTTTACAAAGGATGGCTGCACGAGAAGACTCTAACACCCACCAAAGCTGGATCTGGAATGGTGGTTGCTGTTAAGAAATTGAATTCCGAGAGTTTGCAGGGATTTCGGGAGTGGCAGTCAGAAATAAATTTTTTAGGAAGGATTTCTCACCCAAACCTGGTCAAGCTTTTGGGTTACTGTTGTGACGATGTGGAATTTCTGCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTGGAGAACCATCTCTTTAGAAGAAATTCTAGCACAGAACCATTGTCTTGGGACACCCGACTCAAAATAGCTATTGGTGCAGCTCGAGGCTTGGCTTTCTTACACACCTCAGAAAAGAAAATCATATACAGAGATTTCAAAGCCTCCAATATACTACTTGATGAGGATTACAATGCAAAAATTTCAGATTTTGGCTTGGCCAAATTAGGCCCTTCTGGGGGAGATTCACACGTGAGTACCAGGATCATGGGCACATATGGCTACGCTGCTCCAGAATATATGGCAACAGGTCATTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTTCTGCTTGAAATTCTGACAGGGTTGCGGGCATTTGATAGAAAGCGCCCCTTCGAGCAGCAGAATCTAATTGAATGGGCTAAGCCTTCTCTCTCTGATAAAAGAATGTTGAAAAGCATAATGGATGAGAGAATGGAGGGTCAGTATTCAACCAATGCAGCAATGAAAGCAGCACGTTTAACTCTAAAATGCCTTGAAAGCGACCCTAAAAAACGTCCTCCCATGAGAGATGTTCTGGAGACATTGGAACGGATCGAAGTTATCAAGGATAGAAGGAAATAA 1086 0.4429 MGLCFASLSPHQTPSESLHYSGSGREGTGVNGGSSSSGSSNNVVFPSMETRNLKQFSFVDLKAATRSFRSDALLGEGGFGKVYKGWLHEKTLTPTKAGSGMVVAVKKLNSESLQGFREWQSEINFLGRISHPNLVKLLGYCCDDVEFLLVYEFMPRGSLENHLFRRNSSTEPLSWDTRLKIAIGAARGLAFLHTSEKKIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGDSHVSTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEILTGLRAFDRKRPFEQQNLIEWAKPSLSDKRMLKSIMDERMEGQYSTNAAMKAARLTLKCLESDPKKRPPMRDVLETLERIEVIKDRRK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00995 361 CDD STKc_IRAK 74 353 - -
Spst2g00995 361 Pfam Protein tyrosine and serine/threonine kinase 72 350 IPR001245 GO:0004672|GO:0006468
Spst2g00995 361 FunFam Serine/threonine-protein kinase BIK1 35 153 - -
Spst2g00995 361 Gene3D Transferase(Phosphotransferase) domain 1 154 360 - -
Spst2g00995 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Spst2g00995 361 MobiDBLite consensus disorder prediction 8 43 - -
Spst2g00995 361 PANTHER OS01G0588500 PROTEIN-RELATED 41 353 - -
Spst2g00995 361 ProSitePatterns Protein kinases ATP-binding region signature. 74 107 IPR017441 GO:0005524
Spst2g00995 361 MobiDBLite consensus disorder prediction 6 43 - -
Spst2g00995 361 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00995 361 FunFam Serine/threonine-protein kinase PBS1 154 361 - -
Spst2g00995 361 SUPERFAMILY Protein kinase-like (PK-like) 37 350 IPR011009 -
Spst2g00995 361 Gene3D Phosphorylase Kinase; domain 1 40 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00995 Spst-Chr2 8565219 8567550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00995 54 350 Glycoside Hydrolase AT3G07070 50.671 3.88e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g00995 PK_Tyr_Ser-Thr 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00995 - - gmx:100777578 619.772