Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00992 ATGGAGAAGCAGAACCCTTCCTTGGAACCATTGTCCAACAAGTCTCCATCTTCTCCCTCTGGTGACACTCTCACTCCCATTATCAATCCAACCAGCAACAATCTGCAGGGTGAAAGCATCATGAAAACCCCTTGGCAAGTCTTGGAGGAACTCTGTGGTGAAAGCAGTGATGATGACAGTGGTGGTGAGGATGACCTTGGTGGTGGAAGTGGTAATTACAGAAGAGAAGAGAATGGTGTTAGTGGTGGTAGTAGTGATGATAATAACAACAATGATGGAGTTGGTGGCCGGAGTAGTGGTGGGGCTCCTCCGGTGGCTGTGGCAGTGGCAGTGGGTGGTGATGGTGGTGGTAGTGGTGGTAGGATGGAGATGGTGGAGGGTGCTGTTGTGAAGGAGGGAGTGCTGGCGAAAAAGAGAAAGACCTCTATAGTGAGAGACCCTCCAATGGGGAAACCTACTTGTCCTCTTTGTTTCAAAGAGTTTCCATCATGGAAGGGTGCGTTTGGCCACATGCGGGCACACCCTGACCGTGATTATCGCGGTTTCTTCAAACCTCCTGCCTTTGGATCCCCATCCTCAACCAAGGGTAACAAGGGTAACACCTCGCAGAGTGGTGATGGTGAAAACAAGAGTACTGGTGAGGTTAACCATGGGGAGAAAGGGCCGTCATTGCCACCTATTCAAGCGCTGATGTTTGATCTGAATGAACCACCTGCAAAGGAGAATGCTGCTGAGCCTGTTGCAGAAAAGACTGATGAGAATGGAATGATCTTTCGATTTGATTTGAATGCTGCGGAGGGCAGTGTTGTTGGATTTGACTTGAATAAGATGCCCTCGGCTGAAGAATGA 849 0.4947 MEKQNPSLEPLSNKSPSSPSGDTLTPIINPTSNNLQGESIMKTPWQVLEELCGESSDDDSGGEDDLGGGSGNYRREENGVSGGSSDDNNNNDGVGGRSSGGAPPVAVAVAVGGDGGGSGGRMEMVEGAVVKEGVLAKKRKTSIVRDPPMGKPTCPLCFKEFPSWKGAFGHMRAHPDRDYRGFFKPPAFGSPSSTKGNKGNTSQSGDGENKSTGEVNHGEKGPSLPPIQALMFDLNEPPAKENAAEPVAEKTDENGMIFRFDLNAAEGSVVGFDLNKMPSAEE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00992 282 ProSitePatterns Zinc finger C2H2 type domain signature. 154 174 IPR013087 -
Spst2g00992 282 MobiDBLite consensus disorder prediction 190 211 - -
Spst2g00992 282 MobiDBLite consensus disorder prediction 77 96 - -
Spst2g00992 282 MobiDBLite consensus disorder prediction 1 41 - -
Spst2g00992 282 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 136 200 - -
Spst2g00992 282 MobiDBLite consensus disorder prediction 182 227 - -
Spst2g00992 282 MobiDBLite consensus disorder prediction 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00992 Spst-Chr2 8530684 8531637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00992 147 200 C2H2 Transcription Factor Family AT4G35280 40.741 2.13e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g00992 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00992 - - pvu:PHAVU_002G115500g 310.457