Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00987 ATGGTGATATCAGAGAACAGATCTAAAACAATCAACCCCACAGGTTTTGAAGGAGGGATAAATTGTGAAAAAAACAGAAAGCTGGGGCAGAACAGAAGGGCGTTGAGCGTGATCAATCAGAATTTAGTGGCGGAAGGGAGATCTTACCCTTGTGTTGTTAACAAGAGAGCATTGGCAGAAAAACAAGATGTTTGTGAGAAGAAGCAGGCGGATCCGGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCACACAGCAAAATCGTGCTGAGGCTGAGGGAACCAAGAAGTCAAACTTGGGAAATTCAAATTCGAACGGATTTGGAGAGGTTATATTTGTTGATGATGAACACAAGCCAACGGGTGACCAACCAGTGCCAATGTCTTTAGAGCAGACAGAGCCAATGCATAGTGAATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATTGATGAGACTGTTTTGGACATTGATACCTGTGATGCAAATAATCCCCTTGCAGTCGTGGATTATATTGAAGATCTTTACACCTACTACAGAAAAACGGAGGATACTAGCCGTGTCTCACCTAATTACATGACACAACAATTTGACATTAATGAAAGGATGAGGGCTATACTCATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACATTGTTTCTTACTGTTAATCTGATAGACAGATTTTTGGCAAAGCAAACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGACTAGTTGCGATGCTTTTAGCATGCAAGTATGAAGAAGTTTCAGTTCCTGTGGTGGGGGATCTGATTCTCATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAATTGATGGTCAACACATTGCAGTTTAACATGTCTGTGCCAACCGCGTATGTTTTTATCAAAAGATTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCTACTTGCTTTCTTCCTGGTGGAGCTATCTCTAGTGGAATATGAGATGTTGAAGTTCCCTCCATCTCTACTAGCAGCAGCTGCTGTTTATACAGCTCAGTGCTCCATTTATGGCTTCAAACAATGGAGTAAAACATGTGAATGGCATTCCAATTACTCAGAAGATCAGCTATTAGAGTGCTCTACATTAATGGTTGATTTTCATCAGAAAGCTGGGAACGGGAAACTTACTGGGGTGCATAGGAAGTACTGTTCTTCTAAATTTGGCTACACTGCAAAATGTGAACCAGCACGTTTTCTTGTGGAGAACTCGTTGTAG 1299 0.4203 MVISENRSKTINPTGFEGGINCEKNRKLGQNRRALSVINQNLVAEGRSYPCVVNKRALAEKQDVCEKKQADPVHRPITRRFAAQIASTQQNRAEAEGTKKSNLGNSNSNGFGEVIFVDDEHKPTGDQPVPMSLEQTEPMHSESDQMEEVEMEDIIDETVLDIDTCDANNPLAVVDYIEDLYTYYRKTEDTSRVSPNYMTQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFIKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCSIYGFKQWSKTCEWHSNYSEDQLLECSTLMVDFHQKAGNGKLTGVHRKYCSSKFGYTAKCEPARFLVENSL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00987 432 MobiDBLite consensus disorder prediction 86 110 - -
Spst2g00987 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
Spst2g00987 432 Gene3D - 193 305 - -
Spst2g00987 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Spst2g00987 432 CDD CYCLIN_AtCycB-like_rpt2 307 423 - -
Spst2g00987 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Spst2g00987 432 SMART Cyclin_C_2 307 424 IPR004367 -
Spst2g00987 432 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Spst2g00987 432 CDD CYCLIN_AtCycB-like_rpt1 157 302 - -
Spst2g00987 432 Gene3D - 179 419 - -
Spst2g00987 432 SMART cyclin_7 214 298 IPR013763 -
Spst2g00987 432 SMART cyclin_7 311 393 IPR013763 -
Spst2g00987 432 PANTHER CYCLINS 137 397 IPR039361 -
Spst2g00987 432 FunFam G2/mitotic-specific cyclin-1 294 419 - -
Spst2g00987 432 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
Spst2g00987 432 PIRSF Cyclin_A_B_D_E 14 432 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00987 Spst-Chr2 8457124 8459744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00987 5 428 Core Cell Cycle Gene Families AT1G20610 57.907 4.16e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00987 K21777 - gmx:100798068 761.525