Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00954 ATGGCGGTCACTGGCGGCGACGACGACAATGGCGTCATCTATCTTCATGGTGACCTTGATTTGAAAATCATCAAGGCGCGGCAGTTGCCGAACATGGACATCTTCTCGGAGCGTCTCCGTCGCTGCGTAACAGCCTGTGACACTATCAAATTCCACTCTGACGACGTCTCCGCCCACGGCGGAAGCCAGCGGACGCGCCACCACAGGAGGATCATCACGAGCGACCCGTACGTGACGGTTTCAGTGCCGCAGGCGACTGTGGCGCGCACGCGAGTGCTGAAGAACTCCCAGGACCCTGAGTGGAACGAGCAGTTCCACATCCCACTCGCGCATCCAGTTGTGGATTTGGAGTTTCGAGTGAAGGACGACGACGTTTTCGGCGCGCAGATGATGGGAACCGTGAAGATTCCGGCGCGGCTGATTGCCACTGGCCAGTTAATTAACGACTGGTTTCCTATCATTGGACCGTCCGGGAAGCCGGCGAAGCGAGACACGGCGTTGCACGTGCAGATGAAATTCACGCCGGTGGAGGAGAATTTGCTTTACCAGCGAGGCATTGCGGCGGATCCGGAGCACCGCGGAGTGAGGAACACGTATTTTCCGGTGAGAAAGGGGAGTTCAGTAAGGTTGTATCAGGATGCGCAATGTCCCGAATCTGGCAAAGGGAAGTTACCGGAGGTAAAGCTTGAGAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGATATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGGTGAAGCTTGTTAGAGAGCCTACTAGGACCTTGCCACGAGATGATTTGACGCTTGGAGAGTTGCTGAAGTATAAGTCTGAAGAAGGAGTGAGAGTGCTGTTGCTGGTTTGGGATGATAAAACTTCGCACGATAAGATTTTACTCAAGACGACTGGTGTGATGCAGACTCATGATGAGGAAACCAGGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTTTGTCGCCTCGCTCTAGACATTGGGTTGTTGGAACGGTCTTCACACACCACCAAAAATGTGTGATTGTGGACACACAGGCTGCTGGGAATAACCGGAAGATAACTGCTTTTATTGGAGGTCTTGATCTATGTGATGGTCGCTATGACACGCCTGAGCATCGTCTTTTTCGTGATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAATGCACCTAGAGAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAAGAAGGCAACTAAATGGAAGGAGTTTGCAATCCTTTTCAAAAAATCCTCTCAATGGCATGATGATGCTTTAATAAGAATAGAACGCATCTCATGGATATTAAGTCCATCAGTTTCCCACTCGGAGGATAATTATACAGTCGTTCCAGAGGATGACCCTTCATTATGGGTTTCTAGTGAAAATGATCCTGAAAACTGGCATGTTCAGAATCTTATTTGTGCTAAAAATTTGGTTATAGACAAAAGCATTCAAACAGCATATATTCAAGCGATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAATACTTCATTGGATCATCGTATGCATGGCCAAATTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAGTTGGCACTGAAAATTACTAGTAAAATCAGAGCTAAGGAAAGATTTGCTGTCTATGTTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAAACGATGCACGCAATGTATGATGTAGTTGCTAAAGAATTGAAAGCAATGCAACTTACTGATAGGCATCCACAAGATTACCTCAATTTTTATTGCCTTGGTAATCGAGAAGACTTTAATGAAGAAAGTTCATGCACAAATGGTGCACAGGTCTCTGGAGCCTATAAACATCGCCGATTTATGATTTATGTGCATGCAAAGGGGATGATTGTTGATGATGAGTACGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACCGAGATAGCTATGGGCGCGTATCAACCCCATTACACATGGTCAACAAAGCAAAGACATCCATATGGCCAGATTTATGGTTACAGAATGTCACTATGGGCAGAGCATCTTGGCATGTTAGATGAAACTTTTGAGGAACCAGAGAGTTTGGAGTGTGTGCATAAAGTGAATGAAATTGCTGTCAATAATTGGAAATTATTCCTTTCTGAAGATTTCTCACTTCTGCAAGGACATCTTCTTAAGTATCCTGTAGAGGTAGATTCCGATGGGAAGATTAGATCCCTACCCAATTGTGAGAATTTCCCGGATGCTGGCGGTAAGATATTGGGGGCTCACTCAACAACTATTCCAGATATCCTAACAACTTAA 2487 0.4511 MAVTGGDDDNGVIYLHGDLDLKIIKARQLPNMDIFSERLRRCVTACDTIKFHSDDVSAHGGSQRTRHHRRIITSDPYVTVSVPQATVARTRVLKNSQDPEWNEQFHIPLAHPVVDLEFRVKDDDVFGAQMMGTVKIPARLIATGQLINDWFPIIGPSGKPAKRDTALHVQMKFTPVEENLLYQRGIAADPEHRGVRNTYFPVRKGSSVRLYQDAQCPESGKGKLPEVKLENGEVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPTRTLPRDDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKILLKTTGVMQTHDEETRKFFKHSSVMCVLSPRSRHWVVGTVFTHHQKCVIVDTQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTNAPREPWHDLHCRIDGPAAYDVLINFEQRWKKATKWKEFAILFKKSSQWHDDALIRIERISWILSPSVSHSEDNYTVVPEDDPSLWVSSENDPENWHVQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPNYKDAGADNLIPMELALKITSKIRAKERFAVYVVLPMWPEGDPKTGAMQEILFWQSQTMHAMYDVVAKELKAMQLTDRHPQDYLNFYCLGNREDFNEESSCTNGAQVSGAYKHRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSTKQRHPYGQIYGYRMSLWAEHLGMLDETFEEPESLECVHKVNEIAVNNWKLFLSEDFSLLQGHLLKYPVEVDSDGKIRSLPNCENFPDAGGKILGAHSTTIPDILTT 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00954 828 SMART pld_4 350 385 IPR001736 GO:0003824
Spst2g00954 828 SMART pld_4 673 700 IPR001736 GO:0003824
Spst2g00954 828 SUPERFAMILY Phospholipase D/nuclease 524 759 - -
Spst2g00954 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Spst2g00954 828 SMART C2_3c 18 150 IPR000008 -
Spst2g00954 828 PIRSF PLD_plant 6 828 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Spst2g00954 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 176 IPR035892 -
Spst2g00954 828 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Spst2g00954 828 FunFam Phospholipase D delta 231 466 - -
Spst2g00954 828 SUPERFAMILY Phospholipase D/nuclease 198 458 - -
Spst2g00954 828 Pfam Phospholipase D Active site motif 350 385 IPR001736 GO:0003824
Spst2g00954 828 Pfam Phospholipase D Active site motif 674 700 IPR001736 GO:0003824
Spst2g00954 828 Pfam C2 domain 17 153 IPR000008 -
Spst2g00954 828 CDD C2_plant_PLD 11 174 - -
Spst2g00954 828 Gene3D Endonuclease Chain A 490 725 - -
Spst2g00954 828 PANTHER PHOSPHOLIPASE D 11 818 IPR015679 -
Spst2g00954 828 Gene3D Endonuclease Chain A 227 469 - -
Spst2g00954 828 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 673 700 IPR001736 GO:0003824
Spst2g00954 828 Gene3D C2 domain 16 183 IPR035892 -
Spst2g00954 828 Pfam Phospholipase D C terminal 747 817 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00954 Spst-Chr2 8200180 8207918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00954 12 664 Phospholipase D Gene Family (Wang group) AT4G35790 68.741 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00954 K01115 - gmx:100814486 1489.55