Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00949 ATGGCTCGACGTGAACTTGGTTATTTCATCCCCAAGAACAAATGCGCCCCGCTCATGCTTCAACTAGCGTGGAACGATGCTGCTACATACGATGCAAAAAACAGATGCGGAGGTCCCAATGGTTCTATTAGATTCATGACTAAACACGAAGCAATCAAGGAATTGGAAAAAGCAGTTCAATACTGTGAAATAGTGAAGGTCAAACTTAAACTTAAGAAAGTTTCATACGCGGACCTTTACCAGCTTGCTGGTGTTGTTGCAGTAGAGGTCACTCAGGGTCCAACTATTGACTTTGTTCCCGGCAGAAGGGTATACCCTATGTGTGATTCGGATAAGTGCCCAGGAGTCCAAAGACTCTTTCTAAATGGTGAAGAAGATGCAAGGAGTTTAAGAAGGAAATTTTCTTTTATGGGACTAAGTGAAGAAAGAGACATTGTAGTTCTATGTGGAGGCCACACATTAATTAGAACGATGTATCCAAAAGTACCCATGGGAGAGACACCTAAGGGTGAGACACATAAAGATCGCTCTAAGTTTGAAGAAAGAAAATGGACAAAGGACCCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTATTGAGTAAGAGTGCATCCTTTACGATGCTTCCGATGGACTATGCTTTAGTAGAGGATCAAGATTTTCGTCACTATGTTGAACGGTATGCAAAGAAACCAGTGCTCTATTATGATTCTAAACACAGTATCAGTCAAGAACGTAAATTACGTACAGTAGCAGCAAAAATTCACACACGCAAATTCAAAGAGAAGCGTGAAATATTACAGAAGCTACAAGCCGTAATGATTGTACAATAA 834 0.4029 MARRELGYFIPKNKCAPLMLQLAWNDAATYDAKNRCGGPNGSIRFMTKHEAIKELEKAVQYCEIVKVKLKLKKVSYADLYQLAGVVAVEVTQGPTIDFVPGRRVYPMCDSDKCPGVQRLFLNGEEDARSLRRKFSFMGLSEERDIVVLCGGHTLIRTMYPKVPMGETPKGETHKDRSKFEERKWTKDPLKFDNSYFKELLSKSASFTMLPMDYALVEDQDFRHYVERYAKKPVLYYDSKHSISQERKLRTVAAKIHTRKFKEKREILQKLQAVMIVQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00949 277 PRINTS Haem peroxidase superfamily signature 144 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Haem peroxidase superfamily signature 16 30 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Haem peroxidase superfamily signature 74 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Haem peroxidase superfamily signature 92 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 SUPERFAMILY Heme-dependent peroxidases 12 232 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 Gene3D Peroxidase, domain 2 120 234 - -
Spst2g00949 277 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 237 IPR044831 GO:0004601|GO:0034599
Spst2g00949 277 Pfam Peroxidase 12 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 FunFam Peroxidase 1 82 - -
Spst2g00949 277 ProSiteProfiles Plant heme peroxidase family profile. 16 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 Gene3D - 3 119 - -
Spst2g00949 277 PRINTS Plant ascorbate peroxidase signature 92 104 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Plant ascorbate peroxidase signature 16 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Plant ascorbate peroxidase signature 212 236 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Plant ascorbate peroxidase signature 34 44 IPR002207 GO:0004601|GO:0006979|GO:0020037
Spst2g00949 277 PRINTS Plant ascorbate peroxidase signature 73 91 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00949 Spst-Chr2 8168894 8173182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00949 72 242 Peroxidase AT4G16270 28.426 1.87e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00949 K00434 - gmx:100813526 207.608