Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00938 ATGACTCTCAAAGGCTTGGTCTCACTTGTCATCAATTTAATTGGCCTACCTGAGGGACAAAGGAACAATGATGACCCTTTACCTTCTTACATGATTCTCACACAAAGGAACAAGCAGCAGTCATCTGAATCTGCAGCAGCATCCAATTTCAGTGAGGATTGCTGGTGTTGTGTGTGCTTGTCAAGGTTGAAGGCCAGAGATGAAATCCGTGTCCTTCCTTGCTCTCACAAATTCCACAAGATTTGTGTAAATAGATGGCTTAAGGGTCACCACAAAACATGTCCACTCTGCCGTTTCTCATTGGGAGCCGAGGAGAAGTCTCATCGTGCTGAAATGTTCACTGAAGAGATGCTGATATGGTTTTCTTCTTTCCATATAGCTGAAAACAAACTTAAACAAATTGGCTTTGTTGTCTGA 417 0.4269 MTLKGLVSLVINLIGLPEGQRNNDDPLPSYMILTQRNKQQSSESAAASNFSEDCWCCVCLSRLKARDEIRVLPCSHKFHKICVNRWLKGHHKTCPLCRFSLGAEEKSHRAEMFTEEMLIWFSSFHIAENKLKQIGFVV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00938 138 CDD RING-H2_PA-TM-RING 56 98 - -
Spst2g00938 138 Pfam Ring finger domain 56 98 IPR001841 -
Spst2g00938 138 SUPERFAMILY RING/U-box 49 102 - -
Spst2g00938 138 ProSiteProfiles Zinc finger RING-type profile. 56 98 IPR001841 -
Spst2g00938 138 PANTHER TARGET OF ERK KINASE MPK-1 38 106 - -
Spst2g00938 138 SMART ring_2 56 97 IPR001841 -
Spst2g00938 138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 103 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00938 Spst-Chr2 8063737 8064250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00938 3 101 C3H Transcription Factor Family AT1G68070 31.579 8.87e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00938 - - gmx:100527665 223.787