Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00931 ATGGCAGAAAACAAAGACGAAATCTATTCTCAAACTTCTGAATGTTCATCAGCCTTAACCATGCCAATGGCTACCAAGTGCATATACTTGTTTCATAGATTCTGCGGTCCTTCCCATTCATGGAACAAAAGCACCACCTCAAAAGGTCGAAGAGTTTTCCACAGAGATGTGGAAAAAGAAGAATTCCAGTATGCTAGTAGTCACTGTCTCTCGTCCTACTACAGTGTCTTTGTGGTTCGATTAGCAATCATGATCATGCTAGCCATCTTGATAGGGTTACTCACTATACTGACCTGGCATTTCACGAAGATTTATACAACAAAATCACTTAACAGTTTGGCATATGGTTTGCGTAATGAACTTCTGCAACGCCCCGTTTTGAGGATGTGGAATATTTTGAACTCTACTTCTGAAATTACTACTGCTCAGGTCAAACTGTCTCAGTATGTGATCAGACGTCACAGCAACCCTGCGACTCAAGCAGAACAAGTTGAGCTGTATGAAACGATGAGGGCTGTAACATGGGCTTTATTTGCTAGTCGGAAAGCTCTGAACTCTATAACTATCAACTATAAGAATGGATTTGTGCATGCATTCCACAGAGACCTGAAGGACAACAACACATTTTACATCTACTCCGATCTTTCAAATTACTCTATGGGAGCCAGCAACACTAATGATGTCAATTCCATTTCAACACATCAAGCTTGGGATGATAAAGCCCCTCGTGGAAACTATTCTGCAATCTGGTACCGTGAACCACTTGACCCTGTGAGTGGTGAAAGGATTGGAAAACCTATGAAAATTGCACCTGAAGACTTGATCAACATAGCTGGCCTTTCCCAAGTACCTGATGGTGTAGCTTCGTGGCACGTAGCCGTGAGCAAGTTCACCGATTCACCACTTCTTTCAGCAGCATTGCCAGTTTGGGATTCTTCTAATAAGACAATTATGGCAGTGGTGGGGGTCACAACTGCACTTTATAGTGTTGGACAGTTAATGAGAGAGCTTGTTGAGTTGCACAGTGGCCATATGTATCTGACTTCCCAAGAGGGTTATTTGCTTGCCACTTCCACAAATGCACCTCTTCTGGCAAATTCAACAAAGCCTCTTAAGCTTAAGATGGCTGTTGACTGTGAAGACGATGTAATTAGACAGGGAGCTGAGTGGTTACAGAGAACTTATGGTAACAATTTTCCTCCAAGTCACGAGATTCATGTAGAGAATGTCAAGCTAGGCCACCAGAGATATTACATTGACTCGTTCTTCCTAAATTTGAAGAGACTTCCTTTGGTAGGTGTGATTATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCTTTCAAAACGCTGGTTATTCTGATATCTGCATCATTATGTATTTTAGTCATTGGGTGTGTTTGCATTTTGATATTGACAAACGGAGTATCAAAGGAAATGAATCTAAGAGCAGAACTGATAAGTCAACTGGAAGCAAGAAGAAAAGCAGAGGCATCAAGCAATTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAGCTGAGGACACCTATGGCAGCAGTAATTGGGTTGCTTGACATTCTCATATCTGATGACTGTCTCACTAATGAACAATATTCAACGGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTCCGTCTTCTTAACAACATCTTGGATCTGAGTAAGGTGGAATCTGGAAAACTGGTCCTAGAGGATGCAGAATTTGACTTAGGAAGGGAACTTGAAGGGCTTGTAGACATGTTTTCTGTTCAGTGCATTAACCACAATGTGGAAACTGTTTTAGACCTGTCTGATGATATGCCAAAGGTAGTTCGGGGTGATTCTGCAAGGGTGGTTCAAGTATTTGCAAATCTTATCAACAATTCAATCAAGTTTACTCCATCGGGTCATATTATTCTGCGAGGATGGAGTGAAAACTCAAGTTCCTCCCTTGGTAGTCCAAATTTTCCTCTTGACCAGAAGAAATTACGGAGTTTACAAAAGTGCAGAGAGAAACCAAATGCAAATCATTCAAAGAAAGCATCTATAAAAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGACCCAAGCAAGTGGGACTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCGACTACTCGACTGCATGGAGGCACTGGTCTTGGTCTATGCATTGTCAGAAACTTGGTTAACAAGATGGGTGGGGACATCAAGGTTGTAAAAAAGGAGGGTCCAGGAACACTGATGCGATTATGCTTGCTTCTCAGTGCGCCCATGGATGTGACAGAACAACAGTGTGCAGTAGATTTGACAGACAATGGCTTAGTGGTACTGCTTGGATTGCATGGCAACATGGGTCGAATAATTACATCCAAGTGGCTACAGAAAAACGGGGTGTGCACAATGGAAGCATCTGACTGGAATGGACTAACTCAAATTTTGAGGGAACTATTTCATGCAAGAAATTCAGTCCATAATACTGACTTTGATGCACACTATCCAGCAAAAGAGGAATTGAAGTCTAAACTACTCAACATACGAGATATGAAGAACCCAATTTTTGTGATTGTTGTTGACATTGGACTACTTGACTTGAGCACAGATATATGGAAGGAACAACTTAACTTCCTTCACAGGTACTTTGGTAGAGCAAAGTTCGTATGGATACTAAATCATGATACTTCCAGTAATATAAAGATGGAGCTCCGTAGGAAAGGGCATATCCTGATGGTCAACAAACCCCTTTACAAAGCAAAAATGATCCATATTTTGGAAGCTGTCATAAAGGAGAGAAATTTTGAGCTACAAAAGAAAAACATGATTGTTCCAAGGACCACAATGAAAGAGGGTGATTTACACGAATTTCTTGAGATTGATTCCACTCATTTTGATGCTGCTAGCTCTGATGATTCTGACACATCTGAAACAGGCGGTTGTAATCCTGTTAGTCCTAATGGAGATAAACCAGTTGAGAAGCTAGATAAAACTCATCCATCCTCACCGTACCATATGAATAACTACCTAGTTAGATCAACCAATGAAAATGAATATTTGGAGGAAAATAATTTGACGAAAGAAGAATCTTCTAGTCCCAGATCTAAATATGCCACTGAAGACAACCAACCTAAATCACTCTTCACCAAAGAGTCATCATCCATTTCAACAGGAGATCAGGATCAAGATTCTGAATGTGGGGAAACACACAGGGTCACCAGCTCAAGTAAAGCAGTAGATGGAAAGAAATGTCTTCAGGGCCTAAAGATTTTGCTTGCAGAAGATACGCCAGTACTTCAAAGGGTTGCTACTATAATGCTTGAAAAAATGGGAGCAGATGTAGTTGCTGTAGGTGATGGACAACAGGCAGTGGAAGCTCTCAACTGCATGTTCAATACTGAAGATTGTAGAAGGGAATCAGCCCAGAAGGAAAGAAACCCAAGACCTCAAACAGAGATTTTGACTTGCCGTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTACGAGGCGACCAAAGAAATCAGGAAATCAGAAGTGGGAACAAGCTTGCACATACCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCCTTGAGGTGGGCATGGATGCTTACTTAACAAAGCCAATAGATTTCAAAATGATGGTGTCCACCATTCTTTCACTCACTAAAAGAACATCTTGA 3750 0.4107 MAENKDEIYSQTSECSSALTMPMATKCIYLFHRFCGPSHSWNKSTTSKGRRVFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMIMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRNELLQRPVLRMWNILNSTSEITTAQVKLSQYVIRRHSNPATQAEQVELYETMRAVTWALFASRKALNSITINYKNGFVHAFHRDLKDNNTFYIYSDLSNYSMGASNTNDVNSISTHQAWDDKAPRGNYSAIWYREPLDPVSGERIGKPMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTNAPLLANSTKPLKLKMAVDCEDDVIRQGAEWLQRTYGNNFPPSHEIHVENVKLGHQRYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQVFANLINNSIKFTPSGHIILRGWSENSSSSLGSPNFPLDQKKLRSLQKCREKPNANHSKKASIKDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIKVVKKEGPGTLMRLCLLLSAPMDVTEQQCAVDLTDNGLVVLLGLHGNMGRIITSKWLQKNGVCTMEASDWNGLTQILRELFHARNSVHNTDFDAHYPAKEELKSKLLNIRDMKNPIFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRAKFVWILNHDTSSNIKMELRRKGHILMVNKPLYKAKMIHILEAVIKERNFELQKKNMIVPRTTMKEGDLHEFLEIDSTHFDAASSDDSDTSETGGCNPVSPNGDKPVEKLDKTHPSSPYHMNNYLVRSTNENEYLEENNLTKEESSSPRSKYATEDNQPKSLFTKESSSISTGDQDQDSECGETHRVTSSSKAVDGKKCLQGLKILLAEDTPVLQRVATIMLEKMGADVVAVGDGQQAVEALNCMFNTEDCRRESAQKERNPRPQTEILTCRPYDLILMDCQMPKMDGYEATKEIRKSEVGTSLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRTS 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00931 1249 Gene3D - 1078 1247 - -
Spst2g00931 1249 SMART HKATPase_4 618 770 IPR003594 -
Spst2g00931 1249 Pfam Response regulator receiver domain 1101 1240 IPR001789 GO:0000160
Spst2g00931 1249 ProSiteProfiles Response regulatory domain profile. 1100 1245 IPR001789 GO:0000160
Spst2g00931 1249 Pfam His Kinase A (phospho-acceptor) domain 506 571 IPR003661 GO:0000155|GO:0007165
Spst2g00931 1249 FunFam Histidine kinase 1-like protein 493 572 - -
Spst2g00931 1249 Gene3D - 493 572 - -
Spst2g00931 1249 CDD REC_hyHK_CKI1_RcsC-like 1101 1241 - -
Spst2g00931 1249 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 493 572 IPR036097 GO:0000155|GO:0007165
Spst2g00931 1249 PANTHER TWO-COMPONENT HISTIDINE KINASE 61 775 - -
Spst2g00931 1249 MobiDBLite consensus disorder prediction 1034 1084 - -
Spst2g00931 1249 MobiDBLite consensus disorder prediction 1047 1073 - -
Spst2g00931 1249 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 768 IPR003594 -
Spst2g00931 1249 CDD HisKA 506 567 IPR003661 GO:0000155|GO:0007165
Spst2g00931 1249 SMART HisKA_10 505 571 IPR003661 GO:0000155|GO:0007165
Spst2g00931 1249 ProSiteProfiles Histidine kinase domain profile. 512 770 IPR005467 -
Spst2g00931 1249 SMART REC_2 1099 1241 IPR001789 GO:0000160
Spst2g00931 1249 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 560 766 IPR036890 -
Spst2g00931 1249 SUPERFAMILY CheY-like 1097 1246 IPR011006 -
Spst2g00931 1249 PRINTS Bacterial sensor protein C-terminal signature 730 748 IPR004358 GO:0016310|GO:0016772
Spst2g00931 1249 PRINTS Bacterial sensor protein C-terminal signature 713 723 IPR004358 GO:0016310|GO:0016772
Spst2g00931 1249 PRINTS Bacterial sensor protein C-terminal signature 695 709 IPR004358 GO:0016310|GO:0016772
Spst2g00931 1249 MobiDBLite consensus disorder prediction 977 1019 - -
Spst2g00931 1249 Gene3D - 573 771 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00931 Spst-Chr2 8005040 8012019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00931 52 1246 Histidine Kinase Gene Family AT2G17820 65.066 0.0 1559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst2g00931 HATPase_c 2.7e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00931 - - vra:106777758 2238.77